RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 OXER1Q8TDS5 423 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 DDX27Q96GQ7 796 aaKnown RBP13.05□□□□□ -0.32
SOD1-202ENST00000389995 PDZD7Q9H5P4 517 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 ZFP14Q9HCL3 533 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 ZNF334Q9HCZ1 680 aaPredicted RBP13.05□□□□□ -0.32
SOD1-202ENST00000389995 GDAQ9Y2T3 454 aa13.05□□□□□ -0.32
SOD1-202ENST00000389995 USO1O60763 962 aaKnown RBP13.04□□□□□ -0.32
SOD1-202ENST00000389995 LRP3O75074 770 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 B3GAT3O94766 335 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 SEC24AO95486 1093 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 PMLP29590 882 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 SOX9P48436 509 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 CLCNKBP51801 687 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 POU5F1BQ06416 359 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 STK3Q13188 491 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 PPP2R5DQ14738 602 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 EARS2Q5JPH6 523 aaKnown RBP13.04□□□□□ -0.32
SOD1-202ENST00000389995 KRT25Q7Z3Z0 450 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 NEK8Q86SG6 692 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 MAP4K3Q8IVH8 894 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 FAM160A2Q8N612 972 aaPredicted RBP13.04□□□□□ -0.32
SOD1-202ENST00000389995 C3orf58Q8NDZ4 430 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 TTC8Q8TAM2 541 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 PIGOQ8TEQ8 1089 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 ASB16Q96NS5 453 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 EIF2AK1Q9BQI3 630 aaKnown RBP13.04□□□□□ -0.32
SOD1-202ENST00000389995 AGXT2Q9BYV1 514 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 ZMYM2Q9UBW7 1377 aa13.04□□□□□ -0.32
SOD1-202ENST00000389995 NUP210Q8TEM1 1887 aaPredicted RBP13.04□□□□□ -0.32
SOD1-202ENST00000389995 PKD1L2Q7Z442 2459 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 CCDC194A0A1B0GVG4 234 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 WDR27A2RRH5 827 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 K7ESF4 209 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 PRRG1O14668 218 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 AXIN1O15169 862 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 DGAT1O75907 488 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 DEXIO95424 95 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 LRG1P02750 347 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 RARRES1P49788 294 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 ROR1Q01973 937 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 ELAVL2Q12926 359 aaKnown RBP13.03□□□□□ -0.32
SOD1-202ENST00000389995 TOB2Q14106 344 aaPredicted RBP13.03□□□□□ -0.32
SOD1-202ENST00000389995 TMEM132AQ24JP5 1023 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 EEF1DP3Q658K8 133 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 IL31Q6EBC2 164 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 PPP4R3AQ6IN85 833 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 PDXDC1Q6P996 788 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 MAMSTRQ6ZN01 415 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 PIK3AP1Q6ZUJ8 805 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 KCNB2Q92953 911 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 IRF7Q92985 503 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 NFKBIZQ9BYH8 718 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 SMOC1Q9H4F8 434 aa13.03□□□□□ -0.32
SOD1-202ENST00000389995 ARHGEF37A1IGU5 675 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 SLC38A8A6NNN8 435 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 MOSPD3O75425 235 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 PRKCBP05771 671 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 PSMC3P17980 439 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 AASDHQ4L235 1098 aaPredicted RBP13.02□□□□□ -0.33
SOD1-202ENST00000389995 BMP2KLQ5H9B9 411 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 CEP68Q76N32 757 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 ABCA7Q8IZY2 2146 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 BSNDQ8WZ55 320 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 RSPRY1Q96DX4 576 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 CCDC43Q96MW1 224 aaKnown RBP13.02□□□□□ -0.33
SOD1-202ENST00000389995 ARRDC1-AS1Q9H2J1 176 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 FZD8Q9H461 694 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 CYP4F11Q9HBI6 524 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 POLD4Q9HCU8 107 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 AVENQ9NQS1 362 aaPredicted RBP13.02□□□□□ -0.33
SOD1-202ENST00000389995 BACE2Q9Y5Z0 518 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 MYO16Q9Y6X6 1858 aa13.02□□□□□ -0.33
SOD1-202ENST00000389995 DENND4CQ5VZ89 1909 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 CPLX1O14810 134 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 ZNF263O14978 683 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 N4BP3O15049 544 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 MYL4P12829 197 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 ELF1P32519 619 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 HSPA4P34932 840 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 PXNP49023 591 aaPredicted RBP13.01□□□□□ -0.33
SOD1-202ENST00000389995 EVCP57679 992 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 SOX4Q06945 474 aaPredicted RBP13.01□□□□□ -0.33
SOD1-202ENST00000389995 PTGDRQ13258 359 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 PRPF4BQ13523 1007 aaKnown RBP13.01□□□□□ -0.33
SOD1-202ENST00000389995 UPP1Q16831 310 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 TXNDC11Q6PKC3 985 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 ANKS3Q6ZW76 656 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 PDZD4Q76G19 769 aaPredicted RBP13.01□□□□□ -0.33
SOD1-202ENST00000389995 LONP2Q86WA8 852 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 FBXL16Q8N461 479 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 SPEM1Q8N4L4 309 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 ZNF461Q8TAF7 563 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 ZSCAN18Q8TBC5 510 aaPredicted RBP13.01□□□□□ -0.33
SOD1-202ENST00000389995 SMARCD2Q92925 531 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 PPP1R10Q96QC0 940 aaKnown RBP13.01□□□□□ -0.33
SOD1-202ENST00000389995 HSD17B14Q9BPX1 270 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 SH2B1Q9NRF2 756 aaPredicted RBP13.01□□□□□ -0.33
SOD1-202ENST00000389995 ANKEF1Q9NU02 776 aa13.01□□□□□ -0.33
SOD1-202ENST00000389995 PRMT7Q9NVM4 692 aaPredicted RBP13.01□□□□□ -0.33
SOD1-202ENST00000389995 CEP72Q9P209 647 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms