RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 TRIM7Q9C029 511 aa18.86■□□□□ 0.61
SQSTM1-202ENST00000389805 TCRBV7S2A1N4TA0A589 114 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 WDR46O15213 610 aaKnown RBP18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 GM2AP17900 193 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 TNFAIP3P21580 790 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 VAMP7P51809 220 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 SESN3P58005 492 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 CCDC137Q6PK04 289 aaKnown RBP18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 CCDC105Q8IYK2 499 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 PRELID2Q8N945 189 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 STMN4Q9H169 189 aaPredicted RBP18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 IRAK4Q9NWZ3 460 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 HAO1Q9UJM8 370 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 PSME4Q14997 1843 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 GJB6O95452 261 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 PLS3P13797 630 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 STX2P32856 288 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 FAM102BQ5T8I3 360 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 VSIG1Q86XK7 387 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 FAM84AQ96KN4 292 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 RPS6KC1Q96S38 1066 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 RPAP3Q9H6T3 665 aaPredicted RBP18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 HSPBP1Q9NZL4 362 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 CNOT7Q9UIV1 285 aaKnown RBP18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 UBE4BO95155 1302 aa18.85■□□□□ 0.61
SQSTM1-202ENST00000389805 AHCYL1O43865 530 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 LGR5O75473 907 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 GBP1P32455 592 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 SP4Q02446 784 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 DHX34Q14147 1143 aaKnown RBP18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 ZNF449Q6P9G9 518 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 MCF2L2Q86YR7 1114 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 SLC9A9Q8IVB4 645 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 RFFLQ8WZ73 363 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 CARD9Q9H257 536 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 PPP1R1BQ9UD71 204 aaPredicted RBP18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 TTC7AQ9ULT0 858 aaPredicted RBP18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 COG5Q9UP83 839 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 A0A0A6YYK5 440 aaPredicted RBP18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 UNC5CO95185 931 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 BRAFP15056 766 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 LMNB1P20700 586 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 XKR9Q5GH70 373 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 NBPF12Q5TAG4 269 aaPredicted RBP18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 TMEM154Q6P9G4 183 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 POTEAQ6S8J7 498 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 ATG4CQ96DT6 458 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 NAP1L3Q99457 506 aaPredicted RBP18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 KIAA1683Q9H0B3 1180 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 GNAZP19086 355 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 RPS6KA3P51812 740 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 TTC8Q8TAM2 541 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 CCDC127Q96BQ5 260 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 ERP27Q96DN0 273 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 ACCSQ96QU6 501 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 NUDCD1Q96RS6 583 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 MYLK2Q9H1R3 596 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 CDC42EP4Q9H3Q1 356 aaKnown RBP18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 RNPEPL1Q9HAU8 725 aa18.84■□□□□ 0.61
SQSTM1-202ENST00000389805 PHF2O75151 1096 aa18.83■□□□□ 0.61
SQSTM1-202ENST00000389805 PEX11AO75192 247 aa18.83■□□□□ 0.61
SQSTM1-202ENST00000389805 PPATQ06203 517 aa18.83■□□□□ 0.61
SQSTM1-202ENST00000389805 NBPF20Q3BBV1 942 aa18.83■□□□□ 0.61
SQSTM1-202ENST00000389805 RNF220Q5VTB9 566 aa18.83■□□□□ 0.61
SQSTM1-202ENST00000389805 RNF207Q6ZRF8 634 aa18.83■□□□□ 0.61
SQSTM1-202ENST00000389805 CBWD2Q8IUF1 395 aa18.83■□□□□ 0.61
SQSTM1-202ENST00000389805 LMNTD2Q8IXW0 634 aa18.83■□□□□ 0.61
SQSTM1-202ENST00000389805 PDCD2LQ9BRP1 358 aa18.83■□□□□ 0.61
SQSTM1-202ENST00000389805 DLGAP2Q9P1A6 1054 aa18.83■□□□□ 0.61
SQSTM1-202ENST00000389805 C2CD2Q9Y426 696 aa18.83■□□□□ 0.61
SQSTM1-202ENST00000389805 CTDP1Q9Y5B0 961 aaPredicted RBP18.83■□□□□ 0.61
SQSTM1-202ENST00000389805 ADRB2P07550 413 aa18.83■□□□□ 0.6
SQSTM1-202ENST00000389805 CALB2P22676 271 aa18.83■□□□□ 0.6
SQSTM1-202ENST00000389805 RFC5P40937 340 aa18.83■□□□□ 0.6
SQSTM1-202ENST00000389805 BAATQ14032 418 aaPredicted RBP18.83■□□□□ 0.6
SQSTM1-202ENST00000389805 CWF19L1Q69YN2 538 aaKnown RBP18.83■□□□□ 0.6
SQSTM1-202ENST00000389805 CKAP2Q8WWK9 683 aa18.83■□□□□ 0.6
SQSTM1-202ENST00000389805 JDP2Q8WYK2 163 aa18.83■□□□□ 0.6
SQSTM1-202ENST00000389805 RGS17Q9UGC6 210 aaPredicted RBP18.83■□□□□ 0.6
SQSTM1-202ENST00000389805 ALG6Q9Y672 507 aa18.83■□□□□ 0.6
SQSTM1-202ENST00000389805 KIF13BQ9NQT8 1826 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 A0A1B0GVG6 124 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 RARGP13631 454 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 ADSSP30520 456 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 TNFAIP8L3Q5GJ75 292 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 PPP1R15BQ5SWA1 713 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 ARHGEF16Q5VV41 709 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 INTS8Q75QN2 995 aaKnown RBP18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 XXYLT1Q8NBI6 393 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 LPAR1Q92633 364 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 TMEM206Q9H813 350 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 PRKAG3Q9UGI9 489 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 ENTPD5O75356 428 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 CCNG1P51959 295 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 CPNE8Q86YQ8 564 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 CYP4X1Q8N118 509 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 RAB3IPQ96QF0 476 aaPredicted RBP18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 AGPAT1Q99943 283 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 PXMP2Q9NR77 195 aa18.82■□□□□ 0.6
SQSTM1-202ENST00000389805 INTUQ9ULD6 942 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms