RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 NLRP12P59046 1061 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 DLG4P78352 724 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 CYP24A1Q07973 514 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 ZBTB6Q15916 424 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 UPP1Q16831 310 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 COBLL1Q53SF7 1204 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 SLC9A9Q8IVB4 645 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 CD302Q8IX05 232 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 OR5B17Q8NGF7 314 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 PLEKHO2Q8TD55 490 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 PPM1EQ8WY54 764 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 TMEM175Q9BSA9 504 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 COLEC11Q9BWP8 271 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 MMRN2Q9H8L6 949 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 NUB1Q9Y5A7 615 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 A0A0C4DFX4 3053 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 PODXLO00592 558 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 KRT19P08727 400 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 TMEM191BP0C7N4 346 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 ERVFC1P60507 584 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 FKBP3Q00688 224 aaKnown RBP12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 LRRC63Q05C16 580 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 CAMK1Q14012 370 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 EDRF1Q3B7T1 1238 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 HSP90AA4PQ58FG1 418 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 GPR153Q6NV75 609 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 RBM43Q6ZSC3 357 aaKnown RBP12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 TAS1R1Q7RTX1 841 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 TMC7Q7Z402 723 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 CEP57Q86XR8 500 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 FAM186BQ8IYM0 893 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 VPS52Q8N1B4 723 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 CSGALNACT2Q8N6G5 542 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 MLKLQ8NB16 471 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 BEST2Q8NFU1 509 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 SYAP1Q96A49 352 aaPredicted RBP12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 GAS2L1Q99501 681 aaPredicted RBP12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 GPR62Q9BZJ7 368 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 DPP3Q9NY33 737 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 PUF60Q9UHX1 559 aaKnown RBP12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 ADAM28Q9UKQ2 775 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 UNC80Q8N2C7 3258 aa12.69□□□□□ -0.38
DEPDC4-202ENST00000378244 VCANP13611 3396 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 SYCE3A1L190 88 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 CLSTN1O94985 981 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 PSMC2P35998 433 aaKnown RBP12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 BRCC3P46736 316 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 CCDC85BQ15834 202 aaPredicted RBP12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 SPATA1Q5VX52 437 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 TTI2Q6NXR4 508 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 MED15Q96RN5 788 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 DUSP9Q99956 384 aaKnown RBP12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 TCF25Q9BQ70 676 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 VN1R3Q9BXE9 311 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 GZF1Q9H116 711 aaPredicted RBP12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 C2CD2Q9Y426 696 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 TDRD15B5MCY1 1934 aaKnown RBP12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 XPOTO43592 962 aaKnown RBP12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 ITGB3P05106 788 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 TRIM49P0CI25 452 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 TRIM49CP0CI26 452 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 PPP1R2P41236 205 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 RBM23Q86U06 439 aaKnown RBP12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 PARD3BQ8TEW8 1205 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 MFSD14AQ96MC6 490 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 SRRTQ9BXP5 876 aaKnown RBP12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 ENTPD7Q9NQZ7 604 aa12.68□□□□□ -0.38
DEPDC4-202ENST00000378244 SPTBN5Q9NRC6 3674 aaKnown RBP12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 BICDL2A1A5D9 508 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 FOSL2P15408 326 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 PTMSP20962 102 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 PLCB3Q01970 1234 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 PSMD6Q15008 389 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 FAM171A1Q5VUB5 890 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 TCERG1LQ5VWI1 586 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 PLPP4Q5VZY2 271 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 FUT10Q6P4F1 479 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 DCLRE1AQ6PJP8 1040 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 C1orf127Q8N9H9 656 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 ZNF516Q92618 1163 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 ELMO3Q96BJ8 720 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 TLR9Q9NR96 1032 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 INTS13Q9NVM9 706 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 LRRIQ3A6PVS8 624 aaPredicted RBP12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 POLR2BP30876 1174 aaKnown RBP12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 VAMP7P51809 220 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 BIRC3Q13489 604 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 MYBPC2Q14324 1141 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 TPD52L1Q16890 204 aaPredicted RBP12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 DUOXA2Q1HG44 320 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 DCAF17Q5H9S7 520 aaPredicted RBP12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 KIAA1841Q6NSI8 718 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 CACTINQ8WUQ7 758 aaKnown RBP12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 DDX27Q96GQ7 796 aaKnown RBP12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 ANKRD36BP1Q96IX9 119 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 DNAJC25Q9H1X3 360 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 RWDD2AQ9UIY3 292 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 AGAP1Q9UPQ3 857 aa12.67□□□□□ -0.38
DEPDC4-202ENST00000378244 TIMM13Q9Y5L4 95 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms