RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 C5orf67F2Z3F1 127 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 PLA2G4BP0C869 781 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 HNRNPH3P31942 346 aaKnown RBP13.42□□□□□ -0.26
VRK3-202ENST00000377011 CDC42EP1Q00587 391 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 TFF2Q03403 129 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 MCM6Q14566 821 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 ODR4Q5SWX8 454 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 FKBP15Q5T1M5 1219 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 WDR59Q6PJI9 974 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 EXOC8Q8IYI6 725 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 SYT2Q8N9I0 419 aaPredicted RBP13.42□□□□□ -0.26
VRK3-202ENST00000377011 ATRIPQ8WXE1 791 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 CNOT6LQ96LI5 555 aaKnown RBP13.42□□□□□ -0.26
VRK3-202ENST00000377011 TSPYL1Q9H0U9 437 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 ACBD3Q9H3P7 528 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 FZD8Q9H461 694 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 NXF3Q9H4D5 531 aaKnown RBP13.42□□□□□ -0.26
VRK3-202ENST00000377011 PUF60Q9UHX1 559 aaKnown RBP13.42□□□□□ -0.26
VRK3-202ENST00000377011 PLAGL2Q9UPG8 496 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 MAPK8IP1Q9UQF2 711 aa13.42□□□□□ -0.26
VRK3-202ENST00000377011 PEX3P56589 373 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 ASIC1P78348 528 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 CENPPQ6IPU0 288 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 ZNF280BQ86YH2 543 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 SPPL3Q8TCT6 385 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 BCL7CQ8WUZ0 217 aaPredicted RBP13.41□□□□□ -0.26
VRK3-202ENST00000377011 RUBCNQ92622 972 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 EXOC4Q96A65 974 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 CHP1Q99653 195 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 TRAIPQ9BWF2 469 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 NFKBIZQ9BYH8 718 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 TMEM117Q9H0C3 514 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 EPC1Q9H2F5 836 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 CACNG4Q9UBN1 327 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 DNAJB4Q9UDY4 337 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 L1RE1Q9UN81 338 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 INPP5FQ9Y2H2 1132 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 IPPQ9Y573 584 aa13.41□□□□□ -0.26
VRK3-202ENST00000377011 TARSL2A2RTX5 802 aaKnown RBP13.4□□□□□ -0.26
VRK3-202ENST00000377011 F8W810 466 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 ZNF623O75123 536 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 DDHD2O94830 711 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 TRIM21P19474 475 aaKnown RBP13.4□□□□□ -0.26
VRK3-202ENST00000377011 AKAP5P24588 427 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 NPTX2P47972 431 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 POU5F1BQ06416 359 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 PSMD2Q13200 908 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 TFDP1Q14186 410 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 UNC13DQ70J99 1090 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 SV2BQ7L1I2 683 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 MRPL10Q7Z7H8 261 aaKnown RBP13.4□□□□□ -0.26
VRK3-202ENST00000377011 ADGRD2Q7Z7M1 963 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 COLGALT1Q8NBJ5 622 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 APOL6Q9BWW8 343 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 EDEM3Q9BZQ6 932 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 PDZD7Q9H5P4 517 aa13.4□□□□□ -0.26
VRK3-202ENST00000377011 TRIP11Q15643 1979 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 ERLIN2O94905 339 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 NPTXRO95502 500 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 NAMPTP43490 491 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 MTIF2P46199 727 aaKnown RBP13.39□□□□□ -0.27
VRK3-202ENST00000377011 LRRC63Q05C16 580 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 MAP9Q49MG5 647 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 CCDC122Q5T0U0 273 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 ANKRD40Q6AI12 368 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 IQCEQ6IPM2 695 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 KIAA1328Q86T90 577 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.39□□□□□ -0.27
VRK3-202ENST00000377011 TMEM130Q8N3G9 435 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 GUF1Q8N442 669 aaKnown RBP13.39□□□□□ -0.27
VRK3-202ENST00000377011 SLC17A8Q8NDX2 589 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 GSTCDQ8NEC7 633 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 RAD54LQ92698 747 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 JAKMIP2Q96AA8 810 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 ZFP42Q96MM3 310 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 PNKPQ96T60 521 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 IKZF4Q9H2S9 585 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 VIPAS39Q9H9C1 493 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 TBC1D13Q9NVG8 400 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 KLK14Q9P0G3 267 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 SAR1BQ9Y6B6 198 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 BDP1A6H8Y1 2624 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 TCF20Q9UGU0 1960 aaKnown RBP13.39□□□□□ -0.27
VRK3-202ENST00000377011 A0A1B0GUA9 196 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 SLC16A4O15374 487 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 EOMESO95936 686 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 POMCP01189 267 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 PRKCBP05771 671 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 IGFBP6P24592 240 aaPredicted RBP13.39□□□□□ -0.27
VRK3-202ENST00000377011 ERVFC1P60507 584 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 TCEAL5Q5H9L2 206 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 MIIPQ5JXC2 388 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 SPOUT1Q5T280 376 aaKnown RBP13.39□□□□□ -0.27
VRK3-202ENST00000377011 GPBP1Q86WP2 473 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 CEP120Q8N960 986 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 GAD1Q99259 594 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 REEP2Q9BRK0 252 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 NRDE2Q9H7Z3 1164 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 GUCA1BQ9UMX6 200 aa13.39□□□□□ -0.27
VRK3-202ENST00000377011 CNTNAP2Q9UHC6 1331 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms