RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 JADE1Q6IE81 842 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 LLGL2Q6P1M3 1020 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 SLC35G2Q8TBE7 412 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 EIF2AQ9BY44 585 aaKnown RBP13.53□□□□□ -0.24
CLCN6-206ENST00000376496 NFKBIZQ9BYH8 718 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 SNX12Q9UMY4 172 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 POLIQ9UNA4 740 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 COG5Q9UP83 839 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 RRN3P2A6NIE6 340 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 EFCAB8A8MWE9 144 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 CLTAP09496 248 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 RHOXF2BP0C7M4 288 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 CYBAP13498 195 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 ACO1P21399 889 aaKnown RBP13.53□□□□□ -0.24
CLCN6-206ENST00000376496 PDE6CP51160 858 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 CACNB2Q08289 660 aaPredicted RBP13.53□□□□□ -0.24
CLCN6-206ENST00000376496 DUOXA2Q1HG44 320 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 DEFB115Q30KQ5 88 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 RNF10Q8N5U6 811 aaKnown RBP13.53□□□□□ -0.24
CLCN6-206ENST00000376496 CAGE1Q8TC20 777 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 DDX1Q92499 740 aaKnown RBP13.53□□□□□ -0.24
CLCN6-206ENST00000376496 OSBPL9Q96SU4 736 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 RHOXF2Q9BQY4 288 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 APOL6Q9BWW8 343 aa13.53□□□□□ -0.24
CLCN6-206ENST00000376496 NXF1Q9UBU9 619 aaKnown RBP13.53□□□□□ -0.24
CLCN6-206ENST00000376496 HAS3O00219 553 aa13.52□□□□□ -0.24
CLCN6-206ENST00000376496 TOMM70O94826 608 aa13.52□□□□□ -0.24
CLCN6-206ENST00000376496 NPTXRO95502 500 aa13.52□□□□□ -0.24
CLCN6-206ENST00000376496 RAP1GAPP47736 663 aa13.52□□□□□ -0.24
CLCN6-206ENST00000376496 ORC1Q13415 861 aa13.52□□□□□ -0.24
CLCN6-206ENST00000376496 SLC10A6Q3KNW5 377 aa13.52□□□□□ -0.24
CLCN6-206ENST00000376496 FBXO38Q6PIJ6 1188 aa13.52□□□□□ -0.24
CLCN6-206ENST00000376496 RSRC2Q7L4I2 434 aaKnown RBP13.52□□□□□ -0.24
CLCN6-206ENST00000376496 CATSPER4Q7RTX7 472 aa13.52□□□□□ -0.24
CLCN6-206ENST00000376496 TPCN2Q8NHX9 752 aa13.52□□□□□ -0.24
CLCN6-206ENST00000376496 PCDHGC5Q9Y5F6 944 aa13.52□□□□□ -0.24
CLCN6-206ENST00000376496 ANO9A1A5B4 782 aa13.52□□□□□ -0.25
CLCN6-206ENST00000376496 HOXA11P31270 313 aaPredicted RBP13.52□□□□□ -0.25
CLCN6-206ENST00000376496 NOGQ13253 232 aa13.52□□□□□ -0.25
CLCN6-206ENST00000376496 TRPC3Q13507 836 aa13.52□□□□□ -0.25
CLCN6-206ENST00000376496 FAM187BQ17R55 369 aa13.52□□□□□ -0.25
CLCN6-206ENST00000376496 C10orf76Q5T2E6 689 aa13.52□□□□□ -0.25
CLCN6-206ENST00000376496 CPNE8Q86YQ8 564 aa13.52□□□□□ -0.25
CLCN6-206ENST00000376496 IFNLR1Q8IU57 520 aaPredicted RBP13.52□□□□□ -0.25
CLCN6-206ENST00000376496 C7orf31Q8N865 590 aa13.52□□□□□ -0.25
CLCN6-206ENST00000376496 CTNNBL1Q8WYA6 563 aaPredicted RBP13.52□□□□□ -0.25
CLCN6-206ENST00000376496 MBLAC1A4D2B0 266 aaPredicted RBP13.51□□□□□ -0.25
CLCN6-206ENST00000376496 CTAGE15A4D2H0 777 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 TMEM110-MUSTN1A8MSY1 372 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 CTAGE8P0CG41 777 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 POU5F1BQ06416 359 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 C2orf54Q08AI8 447 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 WHAMMP3Q1A5X7 153 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 FAM47CQ5HY64 1035 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 MFSD14CQ5VZR4 134 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 CTAGE6Q86UF2 777 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 CTAGE4Q8IX94 777 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 TXLNBQ8N3L3 684 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 CPA5Q8WXQ8 436 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 BTBD6Q96KE9 485 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 SIX4Q9UIU6 781 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 TRIP11Q15643 1979 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 A0A1B0GUA9 196 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 BUB1BO60566 1050 aaPredicted RBP13.51□□□□□ -0.25
CLCN6-206ENST00000376496 ZC3H11AO75152 810 aaKnown RBP eCLIP13.51□□□□□ -0.25
CLCN6-206ENST00000376496 ASS1P00966 412 aaKnown RBP13.51□□□□□ -0.25
CLCN6-206ENST00000376496 ITGB3P05106 788 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 CDH8P55286 799 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 ADAM17P78536 824 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 CDR2Q01850 454 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 CREG2Q8IUH2 290 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 CEP112Q8N8E3 955 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 C1orf127Q8N9H9 656 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 CD99L2Q8TCZ2 262 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 GOLGA1Q92805 767 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 WNT8BQ93098 351 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 ZBTB9Q96C00 473 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 SNTG2Q9NY99 539 aa13.51□□□□□ -0.25
CLCN6-206ENST00000376496 C17orf102A2RUQ5 167 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 DUSP11O75319 330 aaKnown RBP13.5□□□□□ -0.25
CLCN6-206ENST00000376496 MCF2P10911 925 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 ANXA13P27216 316 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 SP3Q02447 781 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 ENPEPQ07075 957 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 ZNF699Q32M78 642 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 GLRA4Q5JXX5 417 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 DAAM2Q86T65 1068 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 LRRC57Q8N9N7 239 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 RBBP8NLQ8NC74 664 aaPredicted RBP13.5□□□□□ -0.25
CLCN6-206ENST00000376496 GCOM2Q9BZD3 368 aaPredicted RBP13.5□□□□□ -0.25
CLCN6-206ENST00000376496 IMPG2Q9BZV3 1241 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 DAAM1Q9Y4D1 1078 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 SMIM35A0A1B0GVV1 85 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 TNNC2P02585 160 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 CTSHP09668 335 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 TMEM253P0C7T8 217 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 PRKAR2AP13861 404 aaKnown RBP13.5□□□□□ -0.25
CLCN6-206ENST00000376496 NBPF20Q3BBV1 942 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 MEI1Q5TIA1 1274 aa13.5□□□□□ -0.25
CLCN6-206ENST00000376496 ZNF410Q86VK4 478 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms