RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 SEC24CP53992 1094 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 GALCP54803 685 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 NLRP11P59045 1033 aaKnown RBP9.78□□□□□ -0.84
CALD1-202ENST00000361901 DYNC1I2Q13409 638 aaKnown RBP9.78□□□□□ -0.84
CALD1-202ENST00000361901 MKRN4PQ13434 485 aaPredicted RBP9.78□□□□□ -0.84
CALD1-202ENST00000361901 ZCWPW2Q504Y3 356 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 HPCAL4Q9UM19 191 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 MYH7BA7E2Y1 1941 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 A0A1W2PQJ5 194 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 KRIT1O00522 736 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 LGR5O75473 907 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 VPS41P49754 854 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 DRP2Q13474 957 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 KIZQ2M2Z5 673 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 CCDC25Q86WR0 208 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 SH2D3CQ8N5H7 860 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 RDM1Q8NG50 284 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 ZNF473Q8WTR7 871 aaKnown RBP9.78□□□□□ -0.84
CALD1-202ENST00000361901 ZC3H15Q8WU90 426 aaKnown RBP9.78□□□□□ -0.84
CALD1-202ENST00000361901 STK33Q9BYT3 514 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 ERAP1Q9NZ08 941 aa9.78□□□□□ -0.84
CALD1-202ENST00000361901 PAIP2BQ9ULR5 123 aaKnown RBP9.78□□□□□ -0.84
CALD1-202ENST00000361901 RTN3O95197 1032 aaPredicted RBP9.77□□□□□ -0.84
CALD1-202ENST00000361901 ADRB2P07550 413 aa9.77□□□□□ -0.84
CALD1-202ENST00000361901 HNRNPCP07910 306 aaKnown RBP eCLIP9.77□□□□□ -0.84
CALD1-202ENST00000361901 HOXD13P35453 343 aa9.77□□□□□ -0.84
CALD1-202ENST00000361901 MAP3K10Q02779 954 aa9.77□□□□□ -0.84
CALD1-202ENST00000361901 TSNAXIP1Q2TAA8 658 aa9.77□□□□□ -0.84
CALD1-202ENST00000361901 SV2AQ7L0J3 742 aa9.77□□□□□ -0.84
CALD1-202ENST00000361901 C7orf31Q8N865 590 aa9.77□□□□□ -0.84
CALD1-202ENST00000361901 NOA1Q8NC60 698 aaKnown RBP9.77□□□□□ -0.84
CALD1-202ENST00000361901 TMEM161BQ8NDZ6 487 aa9.77□□□□□ -0.84
CALD1-202ENST00000361901 SLC20A1Q8WUM9 679 aa9.77□□□□□ -0.84
CALD1-202ENST00000361901 C12orf42Q96LP6 360 aa9.77□□□□□ -0.84
CALD1-202ENST00000361901 ZNF232Q9UNY5 417 aa9.77□□□□□ -0.84
CALD1-202ENST00000361901 PCDHA2Q9Y5H9 948 aa9.77□□□□□ -0.84
CALD1-202ENST00000361901 CDK5RAP2Q96SN8 1893 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 AHCYL1O43865 530 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 MUTP22033 750 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 CETN2P41208 172 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 YARSP54577 528 aaKnown RBP9.77□□□□□ -0.85
CALD1-202ENST00000361901 ORC1Q13415 861 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 TMEM63BQ5T3F8 832 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 ABHD15Q6UXT9 468 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 NLRP14Q86W24 1093 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 ARHGEF19Q8IW93 802 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 ANKRD36BP1Q96IX9 119 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 C11orf70Q9BRQ4 267 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 MKNK1Q9BUB5 465 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 TMEM117Q9H0C3 514 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 DPH5Q9H2P9 285 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 VCX3BQ9H321 246 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 VCX3AQ9NNX9 186 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.77□□□□□ -0.85
CALD1-202ENST00000361901 PGAP2Q9UHJ9 254 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 A0A087WZ62 844 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 A0A0G2JLL6 359 aaPredicted RBP9.77□□□□□ -0.85
CALD1-202ENST00000361901 ESYT3A0FGR9 886 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 SMIM23A6NLE4 172 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 HLA-DRAP01903 254 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 CTSHP09668 335 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 WEE2P0C1S8 567 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 TNNC1P63316 161 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 ROR2Q01974 943 aaKnown RBP9.77□□□□□ -0.85
CALD1-202ENST00000361901 PRRT2Q7Z6L0 340 aaPredicted RBP9.77□□□□□ -0.85
CALD1-202ENST00000361901 PLEKHH3Q7Z736 793 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 SAMD3Q8N6K7 520 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 CPA5Q8WXQ8 436 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 CPB2Q96IY4 423 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 CCT8L2Q96SF2 557 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 FDXACB1Q9BRP7 624 aaPredicted RBP9.77□□□□□ -0.85
CALD1-202ENST00000361901 VIPAS39Q9H9C1 493 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 SPC25Q9HBM1 224 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 SETD4Q9NVD3 440 aa9.77□□□□□ -0.85
CALD1-202ENST00000361901 REXO2Q9Y3B8 237 aaKnown RBP9.77□□□□□ -0.85
CALD1-202ENST00000361901 CCDC160A6NGH7 325 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 PIK3R2O00459 728 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 RGS20O76081 388 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 FARP2O94887 1054 aaPredicted RBP9.76□□□□□ -0.85
CALD1-202ENST00000361901 ARIH2O95376 493 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 SGPL1O95470 568 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 GLRA2P23416 452 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 GUCY2DQ02846 1103 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 BZW1Q7L1Q6 419 aaKnown RBP9.76□□□□□ -0.85
CALD1-202ENST00000361901 TAB3Q8N5C8 712 aaPredicted RBP9.76□□□□□ -0.85
CALD1-202ENST00000361901 KCTD17Q8N5Z5 321 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 BAP1Q92560 729 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 LENG1Q96BZ8 264 aaPredicted RBP9.76□□□□□ -0.85
CALD1-202ENST00000361901 HVCN1Q96D96 273 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 EDEM3Q9BZQ6 932 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 NAGPAQ9UK23 515 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 L3MBTL1Q9Y468 752 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 SSU72P8A0A1W2PR75 194 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 H3BRB1 525 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 LDHAP00338 332 aaKnown RBP9.76□□□□□ -0.85
CALD1-202ENST00000361901 COPB2P35606 906 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 PHKA2P46019 1235 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 TNFAIP2Q03169 654 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 LAMTOR4Q0VGL1 99 aa9.76□□□□□ -0.85
CALD1-202ENST00000361901 MAPK7Q13164 816 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms