RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 TAS2R40P59535 323 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 SLC9A9Q8IVB4 645 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 GABBR1Q9UBS5 961 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 CYP1A2P05177 515 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 ITIH2P19823 946 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 COPS2P61201 443 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 TRAF1Q13077 416 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 GLIS1Q8NBF1 620 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 BSNDQ8WZ55 320 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 RMDN3Q96TC7 470 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 DCLK3Q9C098 648 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 ADAM22Q9P0K1 906 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 UVRAGQ9P2Y5 699 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 SERPINA10Q9UK55 444 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 EXOC7Q9UPT5 735 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 ATP5DP30049 168 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 PIK3CAP42336 1068 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 ERFP50548 548 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 NOP14P78316 857 aaKnown RBP15.31■□□□□ 0.04
CPSF7-201ENST00000340437 SEPT7Q16181 437 aaKnown RBP15.31■□□□□ 0.04
CPSF7-201ENST00000340437 ARHGEF16Q5VV41 709 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 CROCCP2Q86T23 111 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 ATL2Q8NHH9 583 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 RIT2Q99578 217 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 PLCD4Q9BRC7 762 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 C12orf65Q9H3J6 166 aaKnown RBP15.31■□□□□ 0.04
CPSF7-201ENST00000340437 UBE4BO95155 1302 aa15.31■□□□□ 0.04
CPSF7-201ENST00000340437 PAX7P23759 505 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 TARSP26639 723 aaKnown RBP15.3■□□□□ 0.04
CPSF7-201ENST00000340437 MRPS9P82933 396 aaKnown RBP15.3■□□□□ 0.04
CPSF7-201ENST00000340437 EP400NLQ6ZTU2 488 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 P3H4Q92791 437 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 KCND2Q9NZV8 630 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 SEPT9Q9UHD8 586 aaPredicted RBP15.3■□□□□ 0.04
CPSF7-201ENST00000340437 FZD1Q9UP38 647 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 SLC12A4Q9UP95 1085 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 ARL2BPQ9Y2Y0 163 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 RPS6P62753 249 aaKnown RBP15.3■□□□□ 0.04
CPSF7-201ENST00000340437 FASTKD3Q14CZ7 662 aaKnown RBP15.3■□□□□ 0.04
CPSF7-201ENST00000340437 CLEC16AQ2KHT3 1053 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 MTERF2Q49AM1 385 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 BRDTQ58F21 947 aaPredicted RBP15.3■□□□□ 0.04
CPSF7-201ENST00000340437 SWSAP1Q6NVH7 229 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 ERICH1Q86X53 443 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 MCOLN2Q8IZK6 566 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 PSPC1Q8WXF1 523 aaKnown RBP15.3■□□□□ 0.04
CPSF7-201ENST00000340437 FHDC1Q9C0D6 1143 aaPredicted RBP15.3■□□□□ 0.04
CPSF7-201ENST00000340437 LRRC19Q9H756 370 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 AGO4Q9HCK5 861 aaKnown RBP15.3■□□□□ 0.04
CPSF7-201ENST00000340437 TMEM8AQ9HCN3 771 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 SAE1Q9UBE0 346 aaPredicted RBP15.3■□□□□ 0.04
CPSF7-201ENST00000340437 TLR3O15455 904 aaKnown RBP15.3■□□□□ 0.04
CPSF7-201ENST00000340437 TCF4P15884 667 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 NFIL3Q16649 462 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 MICAL1Q8TDZ2 1067 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 ERP27Q96DN0 273 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 SERPINB12Q96P63 405 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 TRAIPQ9BWF2 469 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 OSBPL8Q9BZF1 889 aa15.3■□□□□ 0.04
CPSF7-201ENST00000340437 FSCN2O14926 492 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 CA4P22748 312 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 LIG4P49917 911 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 LACTBP83111 547 aaPredicted RBP15.29■□□□□ 0.04
CPSF7-201ENST00000340437 GPS1Q13098 491 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 ARHGEF18Q6ZSZ5 1173 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 ZNF668Q96K58 619 aaPredicted RBP15.29■□□□□ 0.04
CPSF7-201ENST00000340437 ZBTB45Q96K62 511 aaPredicted RBP15.29■□□□□ 0.04
CPSF7-201ENST00000340437 ROPN1BQ9BZX4 212 aaPredicted RBP15.29■□□□□ 0.04
CPSF7-201ENST00000340437 RANBP17Q9H2T7 1088 aaKnown RBP15.29■□□□□ 0.04
CPSF7-201ENST00000340437 ROPN1Q9HAT0 212 aaPredicted RBP15.29■□□□□ 0.04
CPSF7-201ENST00000340437 HAO1Q9UJM8 370 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 ASTN2O75129 1339 aaPredicted RBP15.29■□□□□ 0.04
CPSF7-201ENST00000340437 MROH7Q68CQ1 1323 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 FOXN2P32314 431 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 MAGEA4P43358 317 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 SESN3P58005 492 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 ZBED8Q8IZ13 594 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 ZNF277Q9NRM2 450 aaPredicted RBP15.29■□□□□ 0.04
CPSF7-201ENST00000340437 WHRNQ9P202 907 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 ZNF70Q9UC06 446 aaPredicted RBP15.29■□□□□ 0.04
CPSF7-201ENST00000340437 DCTN4Q9UJW0 460 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.29■□□□□ 0.04
CPSF7-201ENST00000340437 WNK3Q9BYP7 1800 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 A0A1B0GUA9 196 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 DHX15O43143 795 aaKnown RBP15.29■□□□□ 0.04
CPSF7-201ENST00000340437 PEX19P40855 299 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 SPDYCQ5MJ68 293 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 GRK7Q8WTQ7 553 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 IFT74Q96LB3 600 aa15.29■□□□□ 0.04
CPSF7-201ENST00000340437 ENTPD3O75355 529 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 CCNE2O96020 404 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 ATP11AP98196 1134 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 GTF2BQ00403 316 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 TMEM132AQ24JP5 1023 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 DPH6Q7L8W6 267 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 ANKS1BQ7Z6G8 1248 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 NLRX1Q86UT6 975 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 TMEM161BQ8NDZ6 487 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 CKAP2Q8WWK9 683 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 TMEM143Q96AN5 459 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms