RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 CEP72Q9P209 647 aa17.21■□□□□ 0.35
TSPO-202ENST00000337554 MGAQ8IWI9 3026 aa17.21■□□□□ 0.35
TSPO-202ENST00000337554 TNRC6BQ9UPQ9 1833 aaKnown RBP17.21■□□□□ 0.35
TSPO-202ENST00000337554 CASTOR2A6NHX0 329 aa17.2■□□□□ 0.34
TSPO-202ENST00000337554 CYP3A4P08684 503 aa17.2■□□□□ 0.34
TSPO-202ENST00000337554 HNRNPDQ14103 355 aaKnown RBP17.2■□□□□ 0.34
TSPO-202ENST00000337554 CYP4A22Q5TCH4 519 aa17.2■□□□□ 0.34
TSPO-202ENST00000337554 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.2■□□□□ 0.34
TSPO-202ENST00000337554 SYT13Q7L8C5 426 aa17.2■□□□□ 0.34
TSPO-202ENST00000337554 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
TSPO-202ENST00000337554 SEPT9Q9UHD8 586 aaPredicted RBP17.2■□□□□ 0.34
TSPO-202ENST00000337554 COL4A3BPQ9Y5P4 624 aa17.2■□□□□ 0.34
TSPO-202ENST00000337554 BACE2Q9Y5Z0 518 aa17.2■□□□□ 0.34
TSPO-202ENST00000337554 MAP3K13O43283 966 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 TSPAN1O60635 241 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 SDSP20132 328 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 DGKEP52429 567 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 PDE1AP54750 535 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 ANTXR2P58335 489 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 ROR1Q01973 937 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 TUSC3Q13454 348 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 CAMK2BQ13554 666 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 NAB2Q15742 525 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 WWC2Q6AWC2 1192 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 TOGARAM2Q6ZUX3 1019 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 HEATR3Q7Z4Q2 680 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 C11orf74Q86VG3 221 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 TCEAL8Q8IYN2 117 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 TMEFF1Q8IYR6 380 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 ZNF654Q8IZM8 581 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 HDDC3Q8N4P3 179 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 OR2I1PQ8NGU4 316 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 CTCFLQ8NI51 663 aaPredicted RBP17.19■□□□□ 0.34
TSPO-202ENST00000337554 CPB2Q96IY4 423 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 TPSD1Q9BZJ3 242 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 CSRNP2Q9H175 543 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 CXCL16Q9H2A7 254 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 PCDH15Q96QU1 1955 aa17.19■□□□□ 0.34
TSPO-202ENST00000337554 ANKRD17O75179 2603 aaKnown RBP17.18■□□□□ 0.34
TSPO-202ENST00000337554 ZMYM2Q9UBW7 1377 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 ADAMTS9Q9P2N4 1935 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 PTPRQQ9UMZ3 2332 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 TRABD2BA6NFA1 517 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 OTOL1A6NHN0 477 aaPredicted RBP17.18■□□□□ 0.34
TSPO-202ENST00000337554 TRDMT1O14717 391 aaKnown RBP17.18■□□□□ 0.34
TSPO-202ENST00000337554 SH3BP5O60239 455 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 SRGAP2CP0DJJ0 459 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 MYL4P12829 197 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 PTGER3P43115 390 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 DMC1Q14565 340 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 ARHGAP29Q52LW3 1261 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 STXBP5Q5T5C0 1151 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 CD300LGQ6UXG3 332 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 TMPRSS7Q7RTY8 843 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 SYT12Q8IV01 421 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 ARID3BQ8IVW6 561 aaPredicted RBP17.18■□□□□ 0.34
TSPO-202ENST00000337554 EZH1Q92800 747 aaPredicted RBP17.18■□□□□ 0.34
TSPO-202ENST00000337554 LENG9Q96B70 501 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 DDX27Q96GQ7 796 aaKnown RBP17.18■□□□□ 0.34
TSPO-202ENST00000337554 POLMQ9NP87 494 aaPredicted RBP17.18■□□□□ 0.34
TSPO-202ENST00000337554 INSL5Q9Y5Q6 135 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 PI4KAP42356 2102 aa17.18■□□□□ 0.34
TSPO-202ENST00000337554 MYO9AB2RTY4 2548 aa17.17■□□□□ 0.34
TSPO-202ENST00000337554 COL6A6A6NMZ7 2263 aa17.17■□□□□ 0.34
TSPO-202ENST00000337554 TNFRSF10BO14763 440 aa17.17■□□□□ 0.34
TSPO-202ENST00000337554 WISP1O95388 367 aa17.17■□□□□ 0.34
TSPO-202ENST00000337554 ATF2P15336 505 aa17.17■□□□□ 0.34
TSPO-202ENST00000337554 GRSF1Q12849 480 aaKnown RBP eCLIP17.17■□□□□ 0.34
TSPO-202ENST00000337554 ELAVL2Q12926 359 aaKnown RBP17.17■□□□□ 0.34
TSPO-202ENST00000337554 USP39Q53GS9 565 aaKnown RBP17.17■□□□□ 0.34
TSPO-202ENST00000337554 PEAR1Q5VY43 1037 aaPredicted RBP17.17■□□□□ 0.34
TSPO-202ENST00000337554 SLC8B1Q6J4K2 584 aa17.17■□□□□ 0.34
TSPO-202ENST00000337554 PRPF31Q8WWY3 499 aaKnown RBP17.17■□□□□ 0.34
TSPO-202ENST00000337554 DCBLD2Q96PD2 775 aa17.17■□□□□ 0.34
TSPO-202ENST00000337554 LRRC3Q9BY71 257 aa17.17■□□□□ 0.34
TSPO-202ENST00000337554 TCEAL9Q9UHQ7 104 aa17.17■□□□□ 0.34
TSPO-202ENST00000337554 TAF6LQ9Y6J9 622 aa17.17■□□□□ 0.34
TSPO-202ENST00000337554 ERICH2A1L162 156 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 PRRG1O14668 218 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 PTGESO14684 152 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 CAPN9O14815 690 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 OPHN1O60890 802 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 DDAH1O94760 285 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 NTRK1P04629 796 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 TKTP29401 623 aaKnown RBP17.16■□□□□ 0.34
TSPO-202ENST00000337554 AP3B2Q13367 1082 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 ITPRIPL2Q3MIP1 535 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 XKR3Q5GH77 459 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 C20orf194Q5TEA3 1177 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 NAIF1Q69YI7 327 aaPredicted RBP17.16■□□□□ 0.34
TSPO-202ENST00000337554 CWC27Q6UX04 472 aaKnown RBP17.16■□□□□ 0.34
TSPO-202ENST00000337554 RASSF3Q86WH2 238 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 CCDC82Q8N4S0 544 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 FAM181AQ8N9Y4 354 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 RPLP0P6Q8NHW5 317 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 CCDC51Q96ER9 411 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 FNBP1Q96RU3 617 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 GTPBP2Q9BX10 602 aaKnown RBP17.16■□□□□ 0.34
TSPO-202ENST00000337554 GPR88Q9GZN0 384 aa17.16■□□□□ 0.34
TSPO-202ENST00000337554 CYP4F11Q9HBI6 524 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms