RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ITGB3P05106 788 aa17.86■□□□□ 0.45
SHOX-201ENST00000334060 UBASH3AP57075 661 aa17.86■□□□□ 0.45
SHOX-201ENST00000334060 TMEM132DQ14C87 1099 aa17.86■□□□□ 0.45
SHOX-201ENST00000334060 LMO3Q8TAP4 145 aa17.86■□□□□ 0.45
SHOX-201ENST00000334060 TMC2Q8TDI7 906 aa17.86■□□□□ 0.45
SHOX-201ENST00000334060 KAT5Q92993 513 aa17.86■□□□□ 0.45
SHOX-201ENST00000334060 PPP1R9BQ96SB3 815 aa17.86■□□□□ 0.45
SHOX-201ENST00000334060 LBHD1Q9BQE6 289 aaPredicted RBP17.86■□□□□ 0.45
SHOX-201ENST00000334060 RC3H2Q9HBD1 1191 aaKnown RBP17.86■□□□□ 0.45
SHOX-201ENST00000334060 KIAA1586Q9HCI6 787 aa17.86■□□□□ 0.45
SHOX-201ENST00000334060 SCN1AP35498 2009 aa17.86■□□□□ 0.45
SHOX-201ENST00000334060 EYSQ5T1H1 3165 aa17.85■□□□□ 0.45
SHOX-201ENST00000334060 ABHD14A-ACY1A0A1B0GW23 586 aa17.85■□□□□ 0.45
SHOX-201ENST00000334060 LGALS16A8MUM7 142 aa17.85■□□□□ 0.45
SHOX-201ENST00000334060 NT5C1B-RDH14C9J2C7 533 aa17.85■□□□□ 0.45
SHOX-201ENST00000334060 RNF225M0QZC1 329 aaPredicted RBP17.85■□□□□ 0.45
SHOX-201ENST00000334060 AFPP02771 609 aaKnown RBP17.85■□□□□ 0.45
SHOX-201ENST00000334060 CDR1P51861 262 aa17.85■□□□□ 0.45
SHOX-201ENST00000334060 MCCD1P59942 119 aaPredicted RBP17.85■□□□□ 0.45
SHOX-201ENST00000334060 NR1I3Q14994 352 aa17.85■□□□□ 0.45
SHOX-201ENST00000334060 TRAPPC11Q7Z392 1133 aa17.85■□□□□ 0.45
SHOX-201ENST00000334060 APOBEC3GQ9HC16 384 aaKnown RBP17.85■□□□□ 0.45
SHOX-201ENST00000334060 METTL14Q9HCE5 456 aaKnown RBP17.85■□□□□ 0.45
SHOX-201ENST00000334060 SPTLC1O15269 473 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 DGKIO75912 1065 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 FGFR1OPO95684 399 aaKnown RBP17.84■□□□□ 0.45
SHOX-201ENST00000334060 GNA14O95837 355 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 POLR2BP30876 1174 aaKnown RBP17.84■□□□□ 0.45
SHOX-201ENST00000334060 CLCNKBP51801 687 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 MYL6P60660 151 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 BIRC3Q13489 604 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 ZACNQ401N2 412 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 WDR49Q8IV35 697 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 FAM114A1Q8IWE2 563 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 LRFN2Q9ULH4 789 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 GIT1Q9Y2X7 761 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 TDRD15B5MCY1 1934 aaKnown RBP17.84■□□□□ 0.45
SHOX-201ENST00000334060 I3L4J1 428 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 KRT19P08727 400 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 KCNE1P15382 129 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 MXI1P50539 228 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 MYL7Q01449 175 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 UBXN1Q04323 297 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 CD300LGQ6UXG3 332 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 NPAS4Q8IUM7 802 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 BCL7CQ8WUZ0 217 aaPredicted RBP17.84■□□□□ 0.45
SHOX-201ENST00000334060 ARID3AQ99856 593 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 GDF15Q99988 308 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 TRIM5Q9C035 493 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 SIX2Q9NPC8 291 aa17.84■□□□□ 0.45
SHOX-201ENST00000334060 REV3LO60673 3130 aa17.83■□□□□ 0.45
SHOX-201ENST00000334060 EOMESO95936 686 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 HLA-DRAP01903 254 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 TMEM191BP0C7N4 346 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 PNMA6AP0CW24 399 aaPredicted RBP17.83■□□□□ 0.44
SHOX-201ENST00000334060 ZNF75DP51815 510 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 SYCP1Q15431 976 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 EPC2Q52LR7 807 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 NOMO2Q5JPE7 1267 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 RASIP1Q5U651 963 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 ZSCAN30Q86W11 494 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 ARHGEF19Q8IW93 802 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 HERVK_113Q902F9 699 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 TATDN2Q93075 761 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 RPS6KC1Q96S38 1066 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 ASB7Q9H672 318 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 NRDE2Q9H7Z3 1164 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 DPP3Q9NY33 737 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 NR2E3Q9Y5X4 410 aa17.83■□□□□ 0.44
SHOX-201ENST00000334060 HCRTO43612 131 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 IL18RAPO95256 599 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 ADCY5O95622 1261 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 PFKMP08237 780 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 PBX1P40424 430 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 GLB1LQ6UWU2 654 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 ZNF689Q96CS4 500 aaPredicted RBP17.82■□□□□ 0.44
SHOX-201ENST00000334060 PGBD4Q96DM1 585 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 XYLT2Q9H1B5 865 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 ELAC1Q9H777 363 aaKnown RBP17.82■□□□□ 0.44
SHOX-201ENST00000334060 PLEKHA5Q9HAU0 1116 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 TMEM8AQ9HCN3 771 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 GCNT4Q9P109 453 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 POLIQ9UNA4 740 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 SIK3Q9Y2K2 1263 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 CALCAP01258 141 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 AMHP03971 560 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 THP07101 528 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 LINC00271P0C7V0 271 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 PBX2P40425 430 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 RGS19P49795 217 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 PSRC1Q6PGN9 363 aaPredicted RBP17.82■□□□□ 0.44
SHOX-201ENST00000334060 SARM1Q6SZW1 724 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 FAM207AQ9NSI2 230 aaPredicted RBP17.82■□□□□ 0.44
SHOX-201ENST00000334060 AGAP1Q9UPQ3 857 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 PRG3Q9Y2Y8 225 aaPredicted RBP17.82■□□□□ 0.44
SHOX-201ENST00000334060 C2CD2Q9Y426 696 aa17.82■□□□□ 0.44
SHOX-201ENST00000334060 ZC3H11AO75152 810 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHOX-201ENST00000334060 NOL4O94818 638 aa17.81■□□□□ 0.44
SHOX-201ENST00000334060 PON1P27169 355 aa17.81■□□□□ 0.44
SHOX-201ENST00000334060 KCNJ6P48051 423 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms