RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 ARHGEF3Q9NR81 526 aa20.7■□□□□ 0.9
ZNF554-201ENST00000317243 TCP11X1B4DZS4 312 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 CYP26A1O43174 497 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 ZNF280AP59817 542 aaPredicted RBP20.69■□□□□ 0.9
ZNF554-201ENST00000317243 ATP11AP98196 1134 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 TMEM132BQ14DG7 1078 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 SCARA3Q6AZY7 606 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 SWSAP1Q6NVH7 229 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 RPUSD2Q8IZ73 545 aaKnown RBP20.69■□□□□ 0.9
ZNF554-201ENST00000317243 SLC17A8Q8NDX2 589 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 KRT35Q92764 455 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 NAP1L3Q99457 506 aaPredicted RBP20.69■□□□□ 0.9
ZNF554-201ENST00000317243 MLXIPLQ9NP71 852 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 DENND3A2RUS2 1198 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 LIN7AO14910 233 aaPredicted RBP20.69■□□□□ 0.9
ZNF554-201ENST00000317243 ANXA13P27216 316 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 RAB27AP51159 221 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 BACE1P56817 501 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 LACTBP83111 547 aaPredicted RBP20.69■□□□□ 0.9
ZNF554-201ENST00000317243 CNGA2Q16280 664 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 SLC30A9Q6PML9 568 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 CYFIP1Q7L576 1253 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 SLC9A9Q8IVB4 645 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 TMEM161BQ8NDZ6 487 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 TTC7AQ9ULT0 858 aaPredicted RBP20.69■□□□□ 0.9
ZNF554-201ENST00000317243 ZBED4O75132 1171 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 MUTP22033 750 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 RPL21P46778 160 aaKnown RBP20.69■□□□□ 0.9
ZNF554-201ENST00000317243 WNT7BP56706 349 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 GTF2BQ00403 316 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 OTUD6AQ7L8S5 288 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 FITM2Q8N6M3 262 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 AGPAT1Q99943 283 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 CCDC134Q9H6E4 229 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 ALG6Q9Y672 507 aa20.69■□□□□ 0.9
ZNF554-201ENST00000317243 UBE4BO95155 1302 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 LUC7L3O95232 432 aaKnown RBP20.68■□□□□ 0.9
ZNF554-201ENST00000317243 FTLP02792 175 aaPredicted RBP20.68■□□□□ 0.9
ZNF554-201ENST00000317243 DLATP10515 647 aaKnown RBP20.68■□□□□ 0.9
ZNF554-201ENST00000317243 PTPRAP18433 802 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 SSTR3P32745 418 aaPredicted RBP20.68■□□□□ 0.9
ZNF554-201ENST00000317243 BAG6P46379 1132 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 PSMC5P62195 406 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 SP2Q02086 613 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 SNRNP35Q16560 246 aaKnown RBP20.68■□□□□ 0.9
ZNF554-201ENST00000317243 C2CD6Q53TS8 623 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 NOP9Q86U38 636 aaKnown RBP20.68■□□□□ 0.9
ZNF554-201ENST00000317243 CCDC60Q8IWA6 550 aaPredicted RBP20.68■□□□□ 0.9
ZNF554-201ENST00000317243 CNKSR2Q8WXI2 1034 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 CEP170P1Q96L14 293 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 R3HDMLQ9H3Y0 253 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 CTTNBP2NLQ9P2B4 639 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 NKX1-2Q9UD57 310 aaPredicted RBP20.68■□□□□ 0.9
ZNF554-201ENST00000317243 RASAL2Q9UJF2 1139 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 OAS1P00973 400 aaKnown RBP20.68■□□□□ 0.9
ZNF554-201ENST00000317243 FESP07332 822 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 CNGA1P29973 690 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 TBC1D22BQ9NU19 505 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 ZNF214Q9UL59 606 aaPredicted RBP20.68■□□□□ 0.9
ZNF554-201ENST00000317243 TBX20Q9UMR3 447 aa20.68■□□□□ 0.9
ZNF554-201ENST00000317243 WDR64B1ANS9 1081 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 MAP3K13O43283 966 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 SMIM24O75264 130 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 SUN1O94901 812 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 AGTP01019 485 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 NEFHP12036 1026 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 MXI1P50539 228 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 NUGGCQ68CJ6 796 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 INTS8Q75QN2 995 aaKnown RBP20.67■□□□□ 0.9
ZNF554-201ENST00000317243 C4orf19Q8IY42 314 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 KCTD17Q8N5Z5 321 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 TAS1R2Q8TE23 839 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 ZMYND8Q9ULU4 1186 aaPredicted RBP20.67■□□□□ 0.9
ZNF554-201ENST00000317243 RLFQ13129 1914 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 NCANO14594 1321 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 CHRNB2P17787 502 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 TNFAIP1Q13829 316 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 C6orf118Q5T5N4 469 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 LLGL2Q6P1M3 1020 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 VSIG10LQ86VR7 867 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 IFT74Q96LB3 600 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 TSC22D3Q99576 134 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 GRHL1Q9NZI5 618 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 PARP14Q460N5 1801 aa20.67■□□□□ 0.9
ZNF554-201ENST00000317243 FAM187AA6NFU0 413 aa20.66■□□□□ 0.9
ZNF554-201ENST00000317243 PDHA1P08559 390 aa20.66■□□□□ 0.9
ZNF554-201ENST00000317243 GNAT1P11488 350 aa20.66■□□□□ 0.9
ZNF554-201ENST00000317243 TUBP50607 506 aa20.66■□□□□ 0.9
ZNF554-201ENST00000317243 DHX34Q14147 1143 aaKnown RBP20.66■□□□□ 0.9
ZNF554-201ENST00000317243 TTC27Q6P3X3 843 aa20.66■□□□□ 0.9
ZNF554-201ENST00000317243 NIPA1Q7RTP0 329 aa20.66■□□□□ 0.9
ZNF554-201ENST00000317243 REPS2Q8NFH8 660 aa20.66■□□□□ 0.9
ZNF554-201ENST00000317243 TMEM206Q9H813 350 aa20.66■□□□□ 0.9
ZNF554-201ENST00000317243 PAPOLBQ9NRJ5 636 aaKnown RBP20.66■□□□□ 0.9
ZNF554-201ENST00000317243 POLR2AP24928 1970 aaKnown RBP20.66■□□□□ 0.9
ZNF554-201ENST00000317243 CEP350Q5VT06 3117 aa20.66■□□□□ 0.9
ZNF554-201ENST00000317243 ZNFX1Q9P2E3 1918 aaKnown RBP20.66■□□□□ 0.9
ZNF554-201ENST00000317243 SPDYE5A6NIY4 337 aa20.66■□□□□ 0.9
ZNF554-201ENST00000317243 AHCYL1O43865 530 aa20.66■□□□□ 0.9
ZNF554-201ENST00000317243 CREB1P16220 341 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms