RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

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Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 TMC2Q8TDI7 906 aa13.95□□□□□ -0.18
APTX-201ENST00000309615 BCL7CQ8WUZ0 217 aaPredicted RBP13.95□□□□□ -0.18
APTX-201ENST00000309615 ARNTL2Q8WYA1 636 aa13.95□□□□□ -0.18
APTX-201ENST00000309615 ZNF516Q92618 1163 aa13.95□□□□□ -0.18
APTX-201ENST00000309615 CGRRF1Q99675 332 aa13.95□□□□□ -0.18
APTX-201ENST00000309615 ZNF576Q9H609 170 aa13.95□□□□□ -0.18
APTX-201ENST00000309615 DPP3Q9NY33 737 aa13.95□□□□□ -0.18
APTX-201ENST00000309615 FAN1Q9Y2M0 1017 aa13.95□□□□□ -0.18
APTX-201ENST00000309615 RWDD3Q9Y3V2 267 aa13.95□□□□□ -0.18
APTX-201ENST00000309615 PCDHB12Q9Y5F1 795 aa13.95□□□□□ -0.18
APTX-201ENST00000309615 CHD7Q9P2D1 2997 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 KIAA1671Q9BY89 1806 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 XPOTO43592 962 aaKnown RBP13.94□□□□□ -0.18
APTX-201ENST00000309615 ITGB1P05556 798 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 TRIM49P0CI25 452 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 TRIM49CP0CI26 452 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 KRT13P13646 458 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 DUOXA2Q1HG44 320 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 CCDC40Q4G0X9 1142 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 HSP90AA4PQ58FG1 418 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 IRF2BP1Q8IU81 584 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 SLC39A11Q8N1S5 342 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 KLHL23Q8NBE8 558 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 C3orf58Q8NDZ4 430 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 HASPINQ8TF76 798 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 CACTINQ8WUQ7 758 aaKnown RBP13.94□□□□□ -0.18
APTX-201ENST00000309615 NAT10Q9H0A0 1025 aaKnown RBP13.94□□□□□ -0.18
APTX-201ENST00000309615 TTYH1Q9H313 450 aaPredicted RBP13.94□□□□□ -0.18
APTX-201ENST00000309615 MARCH5Q9NX47 278 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 ARMCX3Q9UH62 379 aaPredicted RBP13.94□□□□□ -0.18
APTX-201ENST00000309615 NFE2L3Q9Y4A8 694 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 PDCD11Q14690 1871 aaKnown RBP13.94□□□□□ -0.18
APTX-201ENST00000309615 SZT2Q5T011 3432 aa13.94□□□□□ -0.18
APTX-201ENST00000309615 EPOPA6NHQ4 379 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 C5orf67F2Z3F1 127 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 PODXLO00592 558 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 PPEF2O14830 753 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 KIF4AO95239 1232 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 FGFR1OPO95684 399 aaKnown RBP13.93□□□□□ -0.18
APTX-201ENST00000309615 TMEM191BP0C7N4 346 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 LRPAP1P30533 357 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 RPL9P32969 192 aaKnown RBP13.93□□□□□ -0.18
APTX-201ENST00000309615 C9orf57Q5W0N0 161 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 FRMD5Q7Z6J6 570 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 CREBRFQ8IUR6 639 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 C1orf127Q8N9H9 656 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 DDX27Q96GQ7 796 aaKnown RBP13.93□□□□□ -0.18
APTX-201ENST00000309615 IGSF21Q96ID5 467 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 ANKRD36BP1Q96IX9 119 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 UROC1Q96N76 676 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 SAMD11Q96NU1 681 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 PLVAPQ9BX97 442 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 SAMSN1Q9NSI8 373 aaKnown RBP13.93□□□□□ -0.18
APTX-201ENST00000309615 SPG21Q9NZD8 308 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 FGF18O76093 207 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 B3GAT3O94766 335 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 GNA14O95837 355 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 TNNC2P02585 160 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 ITGB3P05106 788 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 ZNF165P49910 485 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 MCCD1P59942 119 aaPredicted RBP13.93□□□□□ -0.18
APTX-201ENST00000309615 MYL5Q02045 173 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 PPP3CAQ08209 521 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 DCAF17Q5H9S7 520 aaPredicted RBP13.93□□□□□ -0.18
APTX-201ENST00000309615 TCERG1LQ5VWI1 586 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 CD300LGQ6UXG3 332 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 USP37Q86T82 979 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 AOPEPQ8N6M6 819 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 FBXO22Q8NEZ5 403 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 CXorf38Q8TB03 319 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 CNOT6LQ96LI5 555 aaKnown RBP13.93□□□□□ -0.18
APTX-201ENST00000309615 COLEC11Q9BWP8 271 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 THAP9Q9H5L6 903 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 MMRN2Q9H8L6 949 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 METTL14Q9HCE5 456 aaKnown RBP13.93□□□□□ -0.18
APTX-201ENST00000309615 SIX4Q9UIU6 781 aa13.93□□□□□ -0.18
APTX-201ENST00000309615 ANO9A1A5B4 782 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 PIRO00625 290 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 IKBKBO14920 756 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 RB1P06400 928 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 POLR2BP30876 1174 aaKnown RBP13.92□□□□□ -0.18
APTX-201ENST00000309615 PPM1AP35813 382 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 GCLMP48507 274 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 MARSP56192 900 aaKnown RBP13.92□□□□□ -0.18
APTX-201ENST00000309615 ENPEPQ07075 957 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 NCAPHQ15003 741 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 TDRD10Q5VZ19 366 aaKnown RBP13.92□□□□□ -0.18
APTX-201ENST00000309615 DCLRE1AQ6PJP8 1040 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 TRAPPC11Q7Z392 1133 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 DHX40Q8IX18 779 aaKnown RBP13.92□□□□□ -0.18
APTX-201ENST00000309615 SLC35C1Q96A29 364 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 BPIFA3Q9BQP9 254 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 C11orf84Q9BUA3 381 aaPredicted RBP13.92□□□□□ -0.18
APTX-201ENST00000309615 ALG13Q9NP73 1137 aaKnown RBP13.92□□□□□ -0.18
APTX-201ENST00000309615 FANCLQ9NW38 375 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 ADAM28Q9UKQ2 775 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 ITGA11Q9UKX5 1188 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.92□□□□□ -0.18
APTX-201ENST00000309615 NLRC5Q86WI3 1866 aa13.92□□□□□ -0.18
APTX-201ENST00000309615 TMEM265A0A087WTH1 108 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms