RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 DNAH12Q6ZR08 3092 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 TMEM253P0C7T8 217 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 CXCL8P10145 99 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 MRPS25P82663 173 aaKnown RBP24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 SREBF2Q12772 1141 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 SMC1AQ14683 1233 aaKnown RBP24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 KIZQ2M2Z5 673 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 HDAC7Q8WUI4 952 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 CCDC102AQ96A19 550 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 APBA2Q99767 749 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 LRRC1Q9BTT6 524 aa24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 RBM12Q9NTZ6 932 aaKnown RBP24.11■■□□□ 1.45
PDLIM2-202ENST00000308354 SMIM10L2AP0DMW4 78 aa24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 SMIM10L2BP0DMW5 78 aa24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 MCM3P25205 808 aa24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 NOP14P78316 857 aaKnown RBP24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 IFI16Q16666 785 aaKnown RBP24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 F2P00734 622 aa24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 ARF4P18085 180 aaPredicted RBP24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 POU5F1BQ06416 359 aa24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 CUL2Q13617 745 aa24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 HIC1Q14526 733 aa24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 ENOSF1Q7L5Y1 443 aa24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 EFCAB13Q8IY85 973 aa24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 DDX1Q92499 740 aaKnown RBP24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 PDZD7Q9H5P4 517 aa24.1■■□□□ 1.45
PDLIM2-202ENST00000308354 KAT6AQ92794 2004 aa24.09■■□□□ 1.45
PDLIM2-202ENST00000308354 ANKRD62A6NC57 917 aa24.09■■□□□ 1.45
PDLIM2-202ENST00000308354 ZEB2O60315 1214 aa24.09■■□□□ 1.45
PDLIM2-202ENST00000308354 CASP8Q14790 479 aa24.09■■□□□ 1.45
PDLIM2-202ENST00000308354 CCDC70Q6NSX1 233 aa24.09■■□□□ 1.45
PDLIM2-202ENST00000308354 CYP4F22Q6NT55 531 aa24.09■■□□□ 1.45
PDLIM2-202ENST00000308354 GSPT2Q8IYD1 628 aaKnown RBP24.09■■□□□ 1.45
PDLIM2-202ENST00000308354 ZBTB9Q96C00 473 aa24.09■■□□□ 1.45
PDLIM2-202ENST00000308354 GPBP1L1Q9HC44 474 aaPredicted RBP24.09■■□□□ 1.45
PDLIM2-202ENST00000308354 A0A0A6YYK5 440 aaPredicted RBP24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 MYL3P08590 195 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 MYBL2P10244 700 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 MYL6P60660 151 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 CDR2Q01850 454 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 GABPB1Q06547 395 aaPredicted RBP24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 DUOXA2Q1HG44 320 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 DAAM2Q86T65 1068 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 SOCS4Q8WXH5 440 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 RFFLQ8WZ73 363 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 ISCUQ9H1K1 167 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 RNF14Q9UBS8 474 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 COG5Q9UP83 839 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 ATMINO43313 823 aaPredicted RBP24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 ACO1P21399 889 aaKnown RBP24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 RPS6KA1Q15418 735 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 FAM187BQ17R55 369 aa24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 IFNLR1Q8IU57 520 aaPredicted RBP24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 DMGDHQ9UI17 866 aaKnown RBP24.08■■□□□ 1.45
PDLIM2-202ENST00000308354 KIF4AO95239 1232 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 CLTAP09496 248 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 STAG3L1P0CL83 205 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 OAS2P29728 719 aaKnown RBP24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 RNASE9P60153 205 aaKnown RBP24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 MFSD10Q14728 455 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 TMEM270Q6UE05 265 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 RPF1Q9H9Y2 349 aaKnown RBP24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 CDHR5Q9HBB8 845 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 NCANO14594 1321 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 KCNK3O14649 394 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 MEFVO15553 781 aaPredicted RBP24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 BUB1BO60566 1050 aaPredicted RBP24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 TMEM191BP0C7N4 346 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 TM4SF4P48230 202 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 SLC7A5Q01650 507 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 TAF4BQ92750 862 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 PCDHB4Q9Y5E5 795 aa24.07■■□□□ 1.44
PDLIM2-202ENST00000308354 CA12O43570 354 aa24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 TSPAN1O60635 241 aa24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 RTN2O75298 545 aa24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 ERLIN2O94905 339 aa24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 SSTR3P32745 418 aaPredicted RBP24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 ZNF200P98182 395 aaPredicted RBP24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 RUFY4Q6ZNE9 571 aa24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 IMPG2Q9BZV3 1241 aa24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 AP5M1Q9H0R1 490 aa24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 RRN3P2A6NIE6 340 aa24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 POLR3GO15318 223 aaPredicted RBP24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 AP3M2P53677 418 aa24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 MAP9Q49MG5 647 aa24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 CCNI2Q6ZMN8 369 aaPredicted RBP24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 GABRQQ9UN88 632 aa24.06■■□□□ 1.44
PDLIM2-202ENST00000308354 NRCAMQ92823 1304 aa24.05■■□□□ 1.44
PDLIM2-202ENST00000308354 H3BQF6 201 aa24.05■■□□□ 1.44
PDLIM2-202ENST00000308354 ASS1P00966 412 aaKnown RBP24.05■■□□□ 1.44
PDLIM2-202ENST00000308354 NFICP08651 508 aa24.05■■□□□ 1.44
PDLIM2-202ENST00000308354 PSMC4P43686 418 aa24.05■■□□□ 1.44
PDLIM2-202ENST00000308354 TRPC3Q13507 836 aa24.05■■□□□ 1.44
PDLIM2-202ENST00000308354 PEX26Q7Z412 305 aa24.05■■□□□ 1.44
PDLIM2-202ENST00000308354 SLFN11Q7Z7L1 901 aa24.05■■□□□ 1.44
PDLIM2-202ENST00000308354 TRPV1Q8NER1 839 aa24.05■■□□□ 1.44
PDLIM2-202ENST00000308354 FAM81BQ96LP2 452 aa24.05■■□□□ 1.44
PDLIM2-202ENST00000308354 GDAP1L1Q96MZ0 367 aa24.05■■□□□ 1.44
PDLIM2-202ENST00000308354 CTTNBP2NLQ9P2B4 639 aa24.05■■□□□ 1.44
PDLIM2-202ENST00000308354 LACTBL1A8MY62 500 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms