RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 MROH7Q68CQ1 1323 aa16.53■□□□□ 0.24
COPS3-201ENST00000268717 ARVCFO00192 962 aa16.52■□□□□ 0.24
COPS3-201ENST00000268717 B4GALT5O43286 388 aa16.52■□□□□ 0.24
COPS3-201ENST00000268717 CLTAP09496 248 aa16.52■□□□□ 0.24
COPS3-201ENST00000268717 CLTBP09497 229 aa16.52■□□□□ 0.24
COPS3-201ENST00000268717 IQCF3P0C7M6 154 aa16.52■□□□□ 0.24
COPS3-201ENST00000268717 BMP8BP34820 402 aa16.52■□□□□ 0.24
COPS3-201ENST00000268717 PIK3CAP42336 1068 aa16.52■□□□□ 0.24
COPS3-201ENST00000268717 WNT7BP56706 349 aa16.52■□□□□ 0.24
COPS3-201ENST00000268717 PURAQ00577 322 aaKnown RBP16.52■□□□□ 0.24
COPS3-201ENST00000268717 TMEM132AQ24JP5 1023 aa16.52■□□□□ 0.24
COPS3-201ENST00000268717 APBB1IPQ7Z5R6 666 aaPredicted RBP16.52■□□□□ 0.24
COPS3-201ENST00000268717 ZBTB33Q86T24 672 aa16.52■□□□□ 0.24
COPS3-201ENST00000268717 GPIHBP1Q8IV16 184 aa16.52■□□□□ 0.24
COPS3-201ENST00000268717 PDZD7Q9H5P4 517 aa16.52■□□□□ 0.24
COPS3-201ENST00000268717 PRDM5Q9NQX1 630 aaPredicted RBP16.52■□□□□ 0.24
COPS3-201ENST00000268717 A0A0A6YYK5 440 aaPredicted RBP16.52■□□□□ 0.23
COPS3-201ENST00000268717 TRIM43BA6NCK2 446 aa16.52■□□□□ 0.23
COPS3-201ENST00000268717 DCDC2CA8MYV0 355 aa16.52■□□□□ 0.23
COPS3-201ENST00000268717 DDX3XO00571 662 aaKnown RBP eCLIP16.52■□□□□ 0.231e-11■■■■■ 78.4
COPS3-201ENST00000268717 VNN1O95497 513 aa16.52■□□□□ 0.23
COPS3-201ENST00000268717 MYL3P08590 195 aa16.52■□□□□ 0.23
COPS3-201ENST00000268717 HARSP12081 509 aaKnown RBP16.52■□□□□ 0.23
COPS3-201ENST00000268717 TBXAS1P24557 533 aaPredicted RBP16.52■□□□□ 0.23
COPS3-201ENST00000268717 BIRC3Q13489 604 aa16.52■□□□□ 0.23
COPS3-201ENST00000268717 DUOXA2Q1HG44 320 aa16.52■□□□□ 0.23
COPS3-201ENST00000268717 EEF1DP3Q658K8 133 aa16.52■□□□□ 0.23
COPS3-201ENST00000268717 NME8Q8N427 588 aa16.52■□□□□ 0.23
COPS3-201ENST00000268717 SLC43A3Q8NBI5 491 aa16.52■□□□□ 0.23
COPS3-201ENST00000268717 TRIM43Q96BQ3 446 aaPredicted RBP16.52■□□□□ 0.23
COPS3-201ENST00000268717 NOX5Q96PH1 765 aa16.52■□□□□ 0.23
COPS3-201ENST00000268717 GCOM2Q9BZD3 368 aaPredicted RBP16.52■□□□□ 0.23
COPS3-201ENST00000268717 GRIN2DO15399 1336 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 A0A1B0GUA9 196 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 TSPAN1O60635 241 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 LRRN2O75325 713 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 GPR32O75388 356 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 ERLIN2O94905 339 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 PNMA6AP0CW24 399 aaPredicted RBP16.51■□□□□ 0.23
COPS3-201ENST00000268717 CYP2C9P11712 490 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 TNFSF9P41273 254 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 FAAP100Q0VG06 881 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 ITGA7Q13683 1181 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 ENOX2Q16206 610 aaKnown RBP16.51■□□□□ 0.23
COPS3-201ENST00000268717 DCAF4L1Q3SXM0 396 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 PAPD7Q5XG87 772 aaKnown RBP16.51■□□□□ 0.23
COPS3-201ENST00000268717 LNX1Q8TBB1 728 aaPredicted RBP16.51■□□□□ 0.23
COPS3-201ENST00000268717 FAXDC2Q96IV6 333 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 SCLT1Q96NL6 688 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 AGPAT1Q99943 283 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 IMPG2Q9BZV3 1241 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 CDC23Q9UJX2 597 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 JRKLQ9Y4A0 524 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 DUSP10Q9Y6W6 482 aa16.51■□□□□ 0.23
COPS3-201ENST00000268717 A0A1W2PPC1 479 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 MACROD2A1Z1Q3 448 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 C17orf102A2RUQ5 167 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 RPLP2P05387 115 aaKnown RBP16.5■□□□□ 0.23
COPS3-201ENST00000268717 H2AFZP0C0S5 128 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 ARF4P18085 180 aaPredicted RBP16.5■□□□□ 0.23
COPS3-201ENST00000268717 AMPD2Q01433 879 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 NCBP1Q09161 790 aaKnown RBP16.5■□□□□ 0.23
COPS3-201ENST00000268717 NCOA4Q13772 614 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 IFI16Q16666 785 aaKnown RBP16.5■□□□□ 0.23
COPS3-201ENST00000268717 LMBRD2Q68DH5 695 aaPredicted RBP16.5■□□□□ 0.23
COPS3-201ENST00000268717 H2AFVQ71UI9 128 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 FAM126BQ8IXS8 530 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 OR5B17Q8NGF7 314 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 EPS8L1Q8TE68 723 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 KAT5Q92993 513 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 CALR3Q96L12 384 aaKnown RBP16.5■□□□□ 0.23
COPS3-201ENST00000268717 ADPGKQ9BRR6 497 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 MTG1Q9BT17 334 aaPredicted RBP16.5■□□□□ 0.23
COPS3-201ENST00000268717 SEZ6LQ9BYH1 1024 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 ASB7Q9H672 318 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 RPF1Q9H9Y2 349 aaKnown RBP16.5■□□□□ 0.23
COPS3-201ENST00000268717 TFR2Q9UP52 801 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 SZT2Q5T011 3432 aa16.5■□□□□ 0.23
COPS3-201ENST00000268717 KIAA0355O15063 1070 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 ASS1P00966 412 aaKnown RBP16.49■□□□□ 0.23
COPS3-201ENST00000268717 TNFAIP3P21580 790 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 AXLP30530 894 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 BPIFB4P59827 614 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 WHAMMP3Q1A5X7 153 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 TAF2Q6P1X5 1199 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 TRAPPC11Q7Z392 1133 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 ZNF677Q86XU0 584 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 NT5DC4Q86YG4 428 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 GLYCTKQ8IVS8 523 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 CD302Q8IX05 232 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 THNSL1Q8IYQ7 743 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 PPP1R13LQ8WUF5 828 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 TAF4BQ92750 862 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 ANKRD36BP1Q96IX9 119 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 LBHD1Q9BQE6 289 aaPredicted RBP16.49■□□□□ 0.23
COPS3-201ENST00000268717 TMEM39AQ9NV64 488 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 NOCTQ9UK39 431 aaKnown RBP16.49■□□□□ 0.23
COPS3-201ENST00000268717 PCDHGC5Q9Y5F6 944 aa16.49■□□□□ 0.23
COPS3-201ENST00000268717 PHACTR2O75167 634 aa16.48■□□□□ 0.23
COPS3-201ENST00000268717 TMEM253P0C7T8 217 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms