RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 KRT5P13647 590 aa9.82□□□□□ -0.84
RPA1-201ENST00000254719 NLRP11P59045 1033 aaKnown RBP9.82□□□□□ -0.84
RPA1-201ENST00000254719 CNTN2Q02246 1040 aa9.82□□□□□ -0.84
RPA1-201ENST00000254719 PPP1R15BQ5SWA1 713 aa9.82□□□□□ -0.84
RPA1-201ENST00000254719 C6orf163Q5TEZ5 329 aa9.82□□□□□ -0.84
RPA1-201ENST00000254719 FAM228AQ86W67 206 aa9.82□□□□□ -0.84
RPA1-201ENST00000254719 SAMD3Q8N6K7 520 aa9.82□□□□□ -0.84
RPA1-201ENST00000254719 NLGN2Q8NFZ4 835 aa9.82□□□□□ -0.84
RPA1-201ENST00000254719 ASAP3Q8TDY4 903 aa9.82□□□□□ -0.84
RPA1-201ENST00000254719 HOMER2Q9NSB8 354 aa9.82□□□□□ -0.84
RPA1-201ENST00000254719 DOCK3Q8IZD9 2030 aa9.82□□□□□ -0.84
RPA1-201ENST00000254719 NFASCO94856 1347 aa9.82□□□□□ -0.84
RPA1-201ENST00000254719 TLDC2A0PJX2 215 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 SPATA31C2B4DYI2 1134 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 PAX7P23759 505 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 QARSP47897 775 aaKnown RBP9.81□□□□□ -0.84
RPA1-201ENST00000254719 MFAP3P55082 362 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 SNRNP35Q16560 246 aaKnown RBP9.81□□□□□ -0.84
RPA1-201ENST00000254719 AGGF1Q8N302 714 aaeCLIP9.81□□□□□ -0.84
RPA1-201ENST00000254719 FBXO25Q8TCJ0 367 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 SREK1Q8WXA9 508 aaKnown RBP9.81□□□□□ -0.84
RPA1-201ENST00000254719 KLRG1Q96E93 195 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 UBE2TQ9NPD8 197 aaPredicted RBP9.81□□□□□ -0.84
RPA1-201ENST00000254719 HOMER3Q9NSC5 361 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 GEMIN8Q9NWZ8 242 aaKnown RBP9.81□□□□□ -0.84
RPA1-201ENST00000254719 TJP2Q9UDY2 1190 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 PLAAQ9Y263 795 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 SPDYE16A6NNV3 312 aaPredicted RBP9.81□□□□□ -0.84
RPA1-201ENST00000254719 LGR5O75473 907 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 FGGP02679 453 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 FTLP02792 175 aaPredicted RBP9.81□□□□□ -0.84
RPA1-201ENST00000254719 COMTP21964 271 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 TMOD1P28289 359 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 HPDP32754 393 aaPredicted RBP9.81□□□□□ -0.84
RPA1-201ENST00000254719 EIF3BP55884 814 aaKnown RBP9.81□□□□□ -0.84
RPA1-201ENST00000254719 PEX3P56589 373 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 MYL7Q01449 175 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 SETDB1Q15047 1291 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 KRT71Q3SY84 523 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 RAB6CQ53S08 254 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 MON1BQ7L1V2 547 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 ADAM33Q9BZ11 813 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 OSBPL7Q9BZF2 842 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 IQCGQ9H095 443 aaKnown RBP9.81□□□□□ -0.84
RPA1-201ENST00000254719 RAB6CQ9H0N0 254 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 PLAC1Q9HBJ0 212 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 PCYOX1Q9UHG3 505 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 TRPC6Q9Y210 931 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 K7ENM7 598 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 PAEPP09466 180 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 ABCB4P21439 1286 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 PEX19P40855 299 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 BACE1P56817 501 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 NAA35Q5VZE5 725 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 C11orf63Q6NUN7 778 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 ADAT2Q7Z6V5 191 aaKnown RBP9.81□□□□□ -0.84
RPA1-201ENST00000254719 RHOT2Q8IXI1 618 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 RPUSD2Q8IZ73 545 aaKnown RBP9.81□□□□□ -0.84
RPA1-201ENST00000254719 OR5B17Q8NGF7 314 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 VPS33BQ9H267 617 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 CHD9Q3L8U1 2897 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 LTBP3Q9NS15 1303 aa9.81□□□□□ -0.84
RPA1-201ENST00000254719 CHKAP35790 457 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 LMNB2Q03252 620 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 CYP24A1Q07973 514 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 MMS22LQ6ZRQ5 1243 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 CCDC105Q8IYK2 499 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 ATP6V0A1Q93050 837 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 MIS12Q9H081 205 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 DHX33Q9H6R0 707 aaKnown RBP9.8□□□□□ -0.84
RPA1-201ENST00000254719 MYLKQ15746 1914 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 SOWAHBA6NEL2 793 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 ARL2P36404 184 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 ARHGAP44Q17R89 818 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 ARMC3Q5W041 872 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 RTKN2Q8IZC4 609 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 CYP4X1Q8N118 509 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 C12orf50Q8NA57 414 aaPredicted RBP9.8□□□□□ -0.84
RPA1-201ENST00000254719 CABS1Q96KC9 395 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 MIF4GDA9UHW6 222 aaKnown RBP9.8□□□□□ -0.84
RPA1-201ENST00000254719 DNM1LO00429 736 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 CTNND1O60716 968 aaKnown RBP9.8□□□□□ -0.84
RPA1-201ENST00000254719 CAND2O75155 1236 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 GABBR2O75899 941 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 ASNSP08243 561 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 RXRBP28702 533 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 LSP1P33241 339 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 PDE6CP51160 858 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 TAS2R40P59535 323 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 IFI35P80217 286 aaPredicted RBP9.8□□□□□ -0.84
RPA1-201ENST00000254719 LMBRD2Q68DH5 695 aaPredicted RBP9.8□□□□□ -0.84
RPA1-201ENST00000254719 TRNP1Q6NT89 227 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 EXOC8Q8IYI6 725 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 CNPY4Q8N129 248 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 ZNF276Q8N554 614 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 CARD9Q9H257 536 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 SEMA4AQ9H3S1 761 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 TXNRD2Q9NNW7 524 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 CHST7Q9NS84 486 aa9.8□□□□□ -0.84
RPA1-201ENST00000254719 C1orf112Q9NSG2 853 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms