RNA–Protein interactions for RNA: ENST00000220478.7

SCG3-201, Transcript of secretogranin III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG3, Length 3,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-201ENST00000220478 EMILIN3Q9NT22 766 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 ARL8BQ9NVJ2 186 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 NINJ2Q9NZG7 142 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 TMCO1Q9UM00 188 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 NIP7Q9Y221 180 aaKnown RBP eCLIP8.41□□□□□ -1.06
SCG3-201ENST00000220478 PTPN22Q9Y2R2 807 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 MRPS23Q9Y3D9 190 aaKnown RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 USH1CQ9Y6N9 552 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 ASTN1O14525 1302 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 PODXLO00592 558 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 CAPN9O14815 690 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 ATP6V1G1O75348 118 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 GFPT2O94808 682 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 ASLP04424 464 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 ZCCHC18P0CG32 403 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 TPP2P29144 1249 aaPredicted RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 EMP3P54852 163 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 PRPF4BQ13523 1007 aaKnown RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 NONOQ15233 471 aaKnown RBP eCLIP8.41□□□□□ -1.06
SCG3-201ENST00000220478 EDRF1Q3B7T1 1238 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 LIN52Q52LA3 116 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 OTOAQ7RTW8 1153 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 PODNQ7Z5L7 613 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 CROCCP2Q86T23 111 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 TSG101Q99816 390 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 ZSWIM1Q9BR11 485 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 STMN4Q9H169 189 aaPredicted RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 VCXQ9H320 206 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 TNRC6CQ9HCJ0 1690 aaKnown RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 ARPP21Q9UBL0 812 aaPredicted RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 GMEB1Q9Y692 573 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 ZMYM2Q9UBW7 1377 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 UMODL1Q5DID0 1318 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 USP17L3A6NCW0 530 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 USP17L4A6NCW7 530 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 GOLGA8HP0CJ92 632 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 CDK7P50613 346 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 PSMC1P62191 440 aaKnown RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 SLC1A5Q15758 541 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 KYNUQ16719 465 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 USP17L1Q7RTZ2 530 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 LCA5Q86VQ0 697 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 DNAJC10Q8IXB1 793 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 SRRM1Q8IYB3 904 aaKnown RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 RNF34Q969K3 372 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 CALML4Q96GE6 196 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 ZNF184Q99676 751 aaPredicted RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 DNAJC18Q9H819 358 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 CLIC5Q9NZA1 410 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 PDP2Q9P2J9 529 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 CHORDC1Q9UHD1 332 aaPredicted RBP8.41□□□□□ -1.06
SCG3-201ENST00000220478 IP6K2Q9UHH9 426 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 TRAF3IP3Q9Y228 551 aa8.41□□□□□ -1.06
SCG3-201ENST00000220478 FOCADQ5VW36 1801 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 TMEM221A6NGB7 291 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 ATMINO43313 823 aaPredicted RBP8.4□□□□□ -1.06
SCG3-201ENST00000220478 MTA2O94776 668 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 ABCB4P21439 1286 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 RPL13P26373 211 aaKnown RBP8.4□□□□□ -1.06
SCG3-201ENST00000220478 GRM2Q14416 872 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 PPP2R5EQ16537 467 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 GSTA3Q16772 222 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 HSF5Q4G112 596 aaPredicted RBP8.4□□□□□ -1.06
SCG3-201ENST00000220478 PPP2R2DQ66LE6 453 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 FRMD5Q7Z6J6 570 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 KRT77Q7Z794 578 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 NSUN4Q96CB9 384 aaKnown RBP8.4□□□□□ -1.06
SCG3-201ENST00000220478 NR1H4Q96RI1 486 aaPredicted RBP8.4□□□□□ -1.06
SCG3-201ENST00000220478 KCNK9Q9NPC2 374 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 DNAJC17Q9NVM6 304 aaKnown RBP8.4□□□□□ -1.06
SCG3-201ENST00000220478 STOML1Q9UBI4 398 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 TBK1Q9UHD2 729 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 POLG2Q9UHN1 485 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 ACTL7BQ9Y614 415 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 MYH11P35749 1972 aa8.4□□□□□ -1.06
SCG3-201ENST00000220478 SPATA31A5Q5VU36 1347 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 SPATA31A6Q5VVP1 1343 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 SPATA31A7Q8IWB4 1347 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 PCDH11YQ9BZA8 1340 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 E9PMD0 336 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 C2CD2LO14523 706 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 TYROBPO43914 113 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 OR6B1O95007 311 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 PABPC4LP0CB38 370 aaKnown RBP8.4□□□□□ -1.07
SCG3-201ENST00000220478 KRT13P13646 458 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 CYP11B2P19099 503 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 ADSSP30520 456 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 STX2P32856 288 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 PPP2R5CQ13362 524 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 PDK4Q16654 411 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 MAPK6Q16659 721 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 SBK1Q52WX2 424 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 C11orf63Q6NUN7 778 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 MTDHQ86UE4 582 aaKnown RBP8.4□□□□□ -1.07
SCG3-201ENST00000220478 TRABD2AQ86V40 505 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 VSIG1Q86XK7 387 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 ZNF34Q8IZ26 560 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 MARCH10Q8NA82 808 aaPredicted RBP8.4□□□□□ -1.07
SCG3-201ENST00000220478 RFWD2Q8NHY2 731 aa8.4□□□□□ -1.07
SCG3-201ENST00000220478 PSPC1Q8WXF1 523 aaKnown RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms