RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 C2orf54Q08AI8 447 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 SPOPLQ6IQ16 392 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 PPP1R2P3Q6NXS1 205 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 RASGEF1CQ8N431 466 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 CCDC102AQ96A19 550 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 SELENOOQ9BVL4 669 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 MTMR12Q9C0I1 747 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 PDZD7Q9H5P4 517 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 RPF1Q9H9Y2 349 aaKnown RBP15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 OGFRQ9NZT2 677 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 UVRAGQ9P2Y5 699 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 TTC7AQ9ULT0 858 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 PACSIN2Q9UNF0 486 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 TLL2Q9Y6L7 1015 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 NRCAMQ92823 1304 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 MBLAC1A4D2B0 266 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 GPR25O00155 361 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 KCNK3O14649 394 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 DYNC1LI2O43237 492 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 TNNC2P02585 160 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 CYP1A1P04798 512 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 UNGP13051 313 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 VSNL1P62760 191 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 SREBF2Q12772 1141 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 PCBP1Q15365 356 aaKnown RBP eCLIP15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 EFCAB13Q8IY85 973 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 THNSL1Q8IYQ7 743 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 KAT2BQ92831 832 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 ELMO3Q96BJ8 720 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 ZNF668Q96K58 619 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 RPS6KC1Q96S38 1066 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 NIF3L1Q9GZT8 377 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 ASB7Q9H672 318 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 AVENQ9NQS1 362 aaPredicted RBP15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 TMEM59LQ9UK28 342 aa15.34■□□□□ 0.05
RTFDC1-201ENST00000023939 EVPLQ92817 2033 aa15.33■□□□□ 0.05
RTFDC1-201ENST00000023939 A0A1B0GUA9 196 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 HAS3O00219 553 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 CST3P01034 146 aaPredicted RBP15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 VTNP04004 478 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 MYBL1P10243 752 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 ARF4P18085 180 aaPredicted RBP15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 TMEM132AQ24JP5 1023 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 PRAMEF19Q5SWL8 479 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 BEND6Q5SZJ8 279 aaPredicted RBP15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 TLK2Q86UE8 772 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 USP38Q8NB14 1042 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 TRIM11Q96F44 468 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 ANKRD36BP1Q96IX9 119 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 MS4A14Q96JA4 679 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 XYLT2Q9H1B5 865 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 GOLPH3Q9H4A6 298 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 CTTNBP2NLQ9P2B4 639 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 PCDHB4Q9Y5E5 795 aa15.33■□□□□ 0.04
RTFDC1-201ENST00000023939 SMIM35A0A1B0GVV1 85 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 MIF4GDA9UHW6 222 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 DDX3YO15523 660 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 TSPAN1O60635 241 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 TMEM191BP0C7N4 346 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 STAG3L1P0CL83 205 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 SMIM10L2AP0DMW4 78 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 SMIM10L2BP0DMW5 78 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 TM4SF4P48230 202 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 MYL6P60660 151 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 CENPCQ03188 943 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 LONRF2Q1L5Z9 754 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 CEP120Q8N960 986 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 RBBP8NLQ8NC74 664 aaPredicted RBP15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 NLRP7Q8WX94 980 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 HHIPL1Q96JK4 782 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 ADAMTS10Q9H324 1103 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 RBM12Q9NTZ6 932 aaKnown RBP15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 SETD4Q9NVD3 440 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 EHD2Q9NZN4 543 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 UMODL1Q5DID0 1318 aa15.32■□□□□ 0.04
RTFDC1-201ENST00000023939 TBC1D8O95759 1140 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 CXCL8P10145 99 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 CPT1AP50416 773 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 ADAM17P78536 824 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 TFAMQ00059 246 aaKnown RBP15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 TRPC3Q13507 836 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 CLUL1Q15846 466 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 TMEM270Q6UE05 265 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 NT5DC4Q86YG4 428 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 FAM212AQ96EL1 285 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 VCPIP1Q96JH7 1222 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.31■□□□□ 0.049e-7■□□□□ 10.7
RTFDC1-201ENST00000023939 FUT8Q9BYC5 575 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 CARD9Q9H257 536 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 SMARCAL1Q9NZC9 954 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 L1RE1Q9UN81 338 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 ALG6Q9Y672 507 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 PGRMC1O00264 195 aaKnown RBP15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 MEFVO15553 781 aaPredicted RBP15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 SEC31AO94979 1220 aaKnown RBP15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 CYP2C19P33261 490 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 MFSD10Q14728 455 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 CCL14Q16627 93 aa15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 APBB1IPQ7Z5R6 666 aaPredicted RBP15.31■□□□□ 0.04
RTFDC1-201ENST00000023939 CD302Q8IX05 232 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms