RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 FAM212AQ96EL1 285 aa24.28■■□□□ 1.48
CHRNA7-231ENST00000637786 KIF12Q96FN5 646 aa24.28■■□□□ 1.48
CHRNA7-231ENST00000637786 FAM193BQ96PV7 902 aaPredicted RBP24.28■■□□□ 1.48
CHRNA7-231ENST00000637786 NAT10Q9H0A0 1025 aaKnown RBP24.28■■□□□ 1.48
CHRNA7-231ENST00000637786 CWH43Q9H720 699 aa24.28■■□□□ 1.48
CHRNA7-231ENST00000637786 RWDD3Q9Y3V2 267 aa24.28■■□□□ 1.48
CHRNA7-231ENST00000637786 LINC00271P0C7V0 271 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 LAG3P18627 525 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 CYP3A5P20815 502 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 DNAJB2P25686 324 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 TMEM132DQ14C87 1099 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 USP37Q86T82 979 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 COLGALT2Q8IYK4 626 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 ENOX1Q8TC92 643 aaKnown RBP24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 TMC2Q8TDI7 906 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 TMEM175Q9BSA9 504 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 DNAJC25Q9H1X3 360 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 NRDE2Q9H7Z3 1164 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 PDE11AQ9HCR9 933 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 AAASQ9NRG9 546 aa24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 UBQLN1Q9UMX0 589 aaKnown RBP24.27■■□□□ 1.48
CHRNA7-231ENST00000637786 DDHD2O94830 711 aa24.26■■□□□ 1.47
CHRNA7-231ENST00000637786 CAVIN2O95810 425 aa24.26■■□□□ 1.47
CHRNA7-231ENST00000637786 GNA14O95837 355 aa24.26■■□□□ 1.47
CHRNA7-231ENST00000637786 NFICP08651 508 aa24.26■■□□□ 1.47
CHRNA7-231ENST00000637786 WNT7BP56706 349 aa24.26■■□□□ 1.47
CHRNA7-231ENST00000637786 JADE1Q6IE81 842 aa24.26■■□□□ 1.47
CHRNA7-231ENST00000637786 ZNF280BQ86YH2 543 aa24.26■■□□□ 1.47
CHRNA7-231ENST00000637786 PARD3BQ8TEW8 1205 aa24.26■■□□□ 1.47
CHRNA7-231ENST00000637786 SAMD11Q96NU1 681 aa24.26■■□□□ 1.47
CHRNA7-231ENST00000637786 FNBP1Q96RU3 617 aa24.26■■□□□ 1.47
CHRNA7-231ENST00000637786 BPIFA3Q9BQP9 254 aa24.26■■□□□ 1.47
CHRNA7-231ENST00000637786 KRT13P13646 458 aa24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 CLDN10P78369 228 aa24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 ANO6Q4KMQ2 910 aa24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 SPATA1Q5VX52 437 aa24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 WDR49Q8IV35 697 aa24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 EFCAB13Q8IY85 973 aa24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 CACTINQ8WUQ7 758 aaKnown RBP24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 TIFAQ96CG3 184 aa24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 EEF2KMTQ96G04 330 aa24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 BORCS6Q96GS4 357 aa24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 UROC1Q96N76 676 aa24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 SRRTQ9BXP5 876 aaKnown RBP24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 NKX2-4Q9H2Z4 354 aa24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 METTL14Q9HCE5 456 aaKnown RBP24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 LAMA3Q16787 3333 aa24.25■■□□□ 1.47
CHRNA7-231ENST00000637786 TMEM265A0A087WTH1 108 aa24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 ZC3H11AO75152 810 aaKnown RBP eCLIP24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 MARSP56192 900 aaKnown RBP24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 TAP1Q03518 808 aa24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 TPD52L1Q16890 204 aaPredicted RBP24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 SPOUT1Q5T280 376 aaKnown RBP24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 FRMD5Q7Z6J6 570 aa24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 BEST2Q8NFU1 509 aa24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 CCDC127Q96BQ5 260 aa24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 TGS1Q96RS0 853 aaKnown RBP24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 CGRRF1Q99675 332 aa24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 PLVAPQ9BX97 442 aa24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 GZF1Q9H116 711 aaPredicted RBP24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 SLC28A3Q9HAS3 691 aa24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 HCSTQ9UBK5 93 aa24.24■■□□□ 1.47
CHRNA7-231ENST00000637786 IKBKBO14920 756 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 B4GALT3O60512 393 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 ARHGEF15O94989 841 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 LRPAP1P30533 357 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 RPL9P32969 192 aaKnown RBP24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 ALDH7A1P49419 539 aaKnown RBP24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 VAMP7P51809 220 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 AP3M2P53677 418 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 BCAR1P56945 870 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 ERVK-21P61565 698 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 SOX4Q06945 474 aaPredicted RBP24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 SPAG1Q07617 926 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 BFSP1Q12934 665 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 PPP2R2DQ66LE6 453 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 KCNT2Q6UVM3 1135 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 COLGALT1Q8NBJ5 622 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 PLEKHO2Q8TD55 490 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 C18orf25Q96B23 403 aaPredicted RBP24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 DDX27Q96GQ7 796 aaKnown RBP24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 ZNF558Q96NG5 402 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 THAP9Q9H5L6 903 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 INTS13Q9NVM9 706 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 DNAJB4Q9UDY4 337 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 ARMCX3Q9UH62 379 aaPredicted RBP24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 PCDHB12Q9Y5F1 795 aa24.23■■□□□ 1.47
CHRNA7-231ENST00000637786 C5orf67F2Z3F1 127 aa24.22■■□□□ 1.47
CHRNA7-231ENST00000637786 ALDH2P05091 517 aa24.22■■□□□ 1.47
CHRNA7-231ENST00000637786 RB1P06400 928 aa24.22■■□□□ 1.47
CHRNA7-231ENST00000637786 GALTP07902 379 aa24.22■■□□□ 1.47
CHRNA7-231ENST00000637786 DLATP10515 647 aaKnown RBP24.22■■□□□ 1.47
CHRNA7-231ENST00000637786 PPM1AP35813 382 aa24.22■■□□□ 1.47
CHRNA7-231ENST00000637786 BMPR1AP36894 532 aa24.22■■□□□ 1.47
CHRNA7-231ENST00000637786 TFAMQ00059 246 aaKnown RBP24.22■■□□□ 1.47
CHRNA7-231ENST00000637786 MYL5Q02045 173 aa24.22■■□□□ 1.47
CHRNA7-231ENST00000637786 DUOXA2Q1HG44 320 aa24.22■■□□□ 1.47
CHRNA7-231ENST00000637786 TUBGCP4Q9UGJ1 667 aa24.22■■□□□ 1.47
CHRNA7-231ENST00000637786 CHD9Q3L8U1 2897 aa24.21■■□□□ 1.47
CHRNA7-231ENST00000637786 LRRIQ3A6PVS8 624 aaPredicted RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms