RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 CCNI2Q6ZMN8 369 aaPredicted RBP16.89■□□□□ 0.29
CHRNA7-212ENST00000636271 CTU1Q7Z7A3 348 aaKnown RBP16.89■□□□□ 0.29
CHRNA7-212ENST00000636271 DNAAF5Q86Y56 855 aa16.89■□□□□ 0.29
CHRNA7-212ENST00000636271 C7orf31Q8N865 590 aa16.89■□□□□ 0.29
CHRNA7-212ENST00000636271 RNF149Q8NC42 400 aa16.89■□□□□ 0.29
CHRNA7-212ENST00000636271 OLIG1Q8TAK6 271 aa16.89■□□□□ 0.29
CHRNA7-212ENST00000636271 LNX1Q8TBB1 728 aaPredicted RBP16.89■□□□□ 0.29
CHRNA7-212ENST00000636271 PPP1R16BQ96T49 567 aa16.89■□□□□ 0.29
CHRNA7-212ENST00000636271 SYT11Q9BT88 431 aa16.89■□□□□ 0.29
CHRNA7-212ENST00000636271 PDE11AQ9HCR9 933 aa16.89■□□□□ 0.29
CHRNA7-212ENST00000636271 PAK6Q9NQU5 681 aaPredicted RBP16.89■□□□□ 0.29
CHRNA7-212ENST00000636271 USP20Q9Y2K6 914 aa16.89■□□□□ 0.29
CHRNA7-212ENST00000636271 LRRIQ3A6PVS8 624 aaPredicted RBP16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 H3BQF6 201 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 VTNP04004 478 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 DNA2P51530 1060 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 ACLYP53396 1101 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 MXD4Q14582 209 aaPredicted RBP16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 RUFY4Q6ZNE9 571 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 GLYCTKQ8IVS8 523 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 LRRC57Q8N9N7 239 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 PCSK9Q8NBP7 692 aaKnown RBP16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 ACBD3Q9H3P7 528 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 RBM12Q9NTZ6 932 aaKnown RBP16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 CES2O00748 559 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 GCLMP48507 274 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 RPS6KA1Q15418 735 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 ARHGAP44Q17R89 818 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 EPC2Q52LR7 807 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 C1orf220Q5T0J3 134 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 MAP4K3Q8IVH8 894 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 ZSWIM2Q8NEG5 633 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 TPCN2Q8NHX9 752 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 DEPTORQ8TB45 409 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 HDAC7Q8WUI4 952 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 TAF4BQ92750 862 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 VTI1AQ96AJ9 217 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 NLRP4Q96MN2 994 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 DEFB118Q96PH6 123 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 FAM49AQ9H0Q0 323 aaPredicted RBP16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 VIPAS39Q9H9C1 493 aa16.88■□□□□ 0.29
CHRNA7-212ENST00000636271 SCN10AQ9Y5Y9 1956 aa16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 C17orf102A2RUQ5 167 aa16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 EDN1P05305 212 aa16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 MYBL2P10244 700 aa16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 CCL5P13501 91 aa16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 GALCP54803 685 aa16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 GLE1Q53GS7 698 aaKnown RBP16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 C8orf74Q6P047 294 aa16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 PLEKHO2Q8TD55 490 aa16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 RNF208Q9H0X6 261 aa16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 GTF2IRD1Q9UHL9 959 aa16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 DMGDHQ9UI17 866 aaKnown RBP16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 AKT3Q9Y243 479 aa16.87■□□□□ 0.29
CHRNA7-212ENST00000636271 FOXN3O00409 490 aaPredicted RBP16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 PMM2O15305 246 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 KIF4AO95239 1232 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 CYP2C9P11712 490 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 TMOD1P28289 359 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 ADSSP30520 456 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 TNNT3P45378 269 aaPredicted RBP16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 CTCFP49711 727 aaPredicted RBP16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 MCCD1P59942 119 aaPredicted RBP16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 TMEM62Q0P6H9 643 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 MINDY3Q9H8M7 445 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 IFT122Q9HBG6 1241 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 UBE2TQ9NPD8 197 aaPredicted RBP16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 EVPLQ92817 2033 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 GOLGA8IPA6NC78 632 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 GOLGA8JA6NMD2 632 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 ANKRD63C9JTQ0 380 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 LRRN2O75325 713 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 CSDE1O75534 798 aaKnown RBP16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 ADRB2P07550 413 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 TNFAIP3P21580 790 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 MXI1P50539 228 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 SNRNP35Q16560 246 aaKnown RBP16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 CDCA2Q69YH5 1023 aaPredicted RBP16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 GDF6Q6KF10 455 aaPredicted RBP16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 SLC39A4Q6P5W5 647 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 ZNF771Q7L3S4 317 aaPredicted RBP16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 SLFN11Q7Z7L1 901 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 ARHGEF19Q8IW93 802 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 GSPT2Q8IYD1 628 aaKnown RBP16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 STIM2Q9P246 746 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 KCNG1Q9UIX4 513 aa16.86■□□□□ 0.29
CHRNA7-212ENST00000636271 A0A087WZ62 844 aa16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 TTLL13PA6NNM8 815 aa16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 K7ERI5 159 aa16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 IQCF3P0C7M6 154 aa16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 TMEM253P0C7T8 217 aa16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 SLC7A5Q01650 507 aa16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 FAM47CQ5HY64 1035 aa16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 FBXO46Q6PJ61 603 aaPredicted RBP16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 CBWD2Q8IUF1 395 aa16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 SYCE1Q8N0S2 351 aa16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 DNAJB3Q8WWF6 145 aa16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 KCNN1Q92952 543 aa16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 FDXACB1Q9BRP7 624 aaPredicted RBP16.85■□□□□ 0.29
CHRNA7-212ENST00000636271 SELENOOQ9BVL4 669 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms