RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 CCNT1O60563 726 aaKnown RBP8.16□□□□□ -1.1
CIITA-214ENST00000636238 CSDE1O75534 798 aaKnown RBP8.16□□□□□ -1.1
CIITA-214ENST00000636238 MICAL2O94851 1124 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 PAPSS2O95340 614 aaPredicted RBP8.16□□□□□ -1.1
CIITA-214ENST00000636238 POMCP01189 267 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 PFKFB1P16118 471 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 CMA1P23946 247 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 CCR3P51677 355 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 NDUFA8P51970 172 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 LIMK1P53667 647 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 DMWDQ09019 674 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 GRIK3Q13003 919 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 DRP2Q13474 957 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 SNW1Q13573 536 aaKnown RBP8.16□□□□□ -1.1
CIITA-214ENST00000636238 MXD4Q14582 209 aaPredicted RBP8.16□□□□□ -1.1
CIITA-214ENST00000636238 GSE1Q14687 1217 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 UBXN2BQ14CS0 331 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 CSRP2Q16527 193 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 IL17AQ16552 155 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 UGCGQ16739 394 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 FUT10Q6P4F1 479 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 SHC4Q6S5L8 630 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 TRMT1LQ7Z2T5 733 aaKnown RBP8.16□□□□□ -1.1
CIITA-214ENST00000636238 NEK8Q86SG6 692 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 ENGASEQ8NFI3 743 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 FGF13Q92913 245 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 FGF14Q92915 247 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 SYAP1Q96A49 352 aaPredicted RBP8.16□□□□□ -1.1
CIITA-214ENST00000636238 ZNF668Q96K58 619 aaPredicted RBP8.16□□□□□ -1.1
CIITA-214ENST00000636238 NLRP4Q96MN2 994 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 PANK2Q9BZ23 570 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 CSRNP2Q9H175 543 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 TMEM60Q9H2L4 133 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 CHRDQ9H2X0 955 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 DHX33Q9H6R0 707 aaKnown RBP8.16□□□□□ -1.1
CIITA-214ENST00000636238 MYO10Q9HD67 2058 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 ADAM28Q9UKQ2 775 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 PRG3Q9Y2Y8 225 aaPredicted RBP8.16□□□□□ -1.1
CIITA-214ENST00000636238 IPPQ9Y573 584 aa8.16□□□□□ -1.1
CIITA-214ENST00000636238 SRPRBQ9Y5M8 271 aaKnown RBP8.16□□□□□ -1.1
CIITA-214ENST00000636238 VWA3AA6NCI4 1184 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 ERLIN2O94905 339 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 TDP2O95551 362 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 TDGF1P13385 188 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 HOXA6P31267 233 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 QARSP47897 775 aaKnown RBP8.15□□□□□ -1.1
CIITA-214ENST00000636238 ATP2C1P98194 919 aaPredicted RBP8.15□□□□□ -1.1
CIITA-214ENST00000636238 FAM160A1Q05DH4 1040 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 TFDP1Q14186 410 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 PPM1JQ5JR12 505 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 PPM1LQ5SGD2 360 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 RESP18Q5W5W9 173 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 PARM1Q6UWI2 310 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 USP49Q70CQ1 688 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 ANO5Q75V66 913 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 OTUD6AQ7L8S5 288 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 TAS1R1Q7RTX1 841 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 GAS2L3Q86XJ1 694 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 FMR1NBQ8N0W7 255 aaPredicted RBP8.15□□□□□ -1.1
CIITA-214ENST00000636238 SMG8Q8ND04 991 aaKnown RBP8.15□□□□□ -1.1
CIITA-214ENST00000636238 FEZF2Q8TBJ5 459 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 PRPF31Q8WWY3 499 aaKnown RBP8.15□□□□□ -1.1
CIITA-214ENST00000636238 FAM20AQ96MK3 541 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 TTPALQ9BTX7 342 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 NUP62CLQ9H1M0 184 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 CLSTN2Q9H4D0 955 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 ANGPTL2Q9UKU9 493 aa8.15□□□□□ -1.1
CIITA-214ENST00000636238 MAP1BP46821 2468 aaKnown RBP8.15□□□□□ -1.1
CIITA-214ENST00000636238 ANKRD11Q6UB99 2663 aaPredicted RBP8.14□□□□□ -1.11
CIITA-214ENST00000636238 DCDC2BA2VCK2 349 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 CHMP2AO43633 222 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 SLC37A4O43826 429 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 TSPAN1O60635 241 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 TADA2AO75478 443 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 ZNF202O95125 648 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 BMP15O95972 392 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 P4HBP07237 508 aaKnown RBP8.14□□□□□ -1.11
CIITA-214ENST00000636238 C8AP07357 584 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 TARSP26639 723 aaKnown RBP8.14□□□□□ -1.11
CIITA-214ENST00000636238 MLH1P40692 756 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 PTENP60484 403 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 SPIRE1Q08AE8 756 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 LAMTOR4Q0VGL1 99 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 PPP2R5CQ13362 524 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 RAB33AQ14088 237 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 HSP90AA2PQ14568 343 aaPredicted RBP8.14□□□□□ -1.11
CIITA-214ENST00000636238 GRASPQ7Z6J2 395 aaPredicted RBP8.14□□□□□ -1.11
CIITA-214ENST00000636238 PALB2Q86YC2 1186 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 POTEDQ86YR6 584 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 NPAS3Q8IXF0 933 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 C4orf19Q8IY42 314 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 ZNF687Q8N1G0 1237 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 ETNPPLQ8TBG4 499 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 ELSPBP1Q96BH3 223 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 EPSTI1Q96J88 318 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 LOXL4Q96JB6 756 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 GAD1Q99259 594 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 NAP1L4Q99733 375 aaKnown RBP8.14□□□□□ -1.11
CIITA-214ENST00000636238 GPR62Q9BZJ7 368 aa8.14□□□□□ -1.11
CIITA-214ENST00000636238 TNMDQ9H2S6 317 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms