RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 CASTOR2A6NHX0 329 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 NT5C1B-RDH14C9J2C7 533 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 ITGB1P05556 798 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 CYP3A5P20815 502 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 NR2F2P24468 414 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 PLCB3Q01970 1234 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 BMS1Q14692 1282 aaKnown RBP14.39□□□□□ -0.11
MDC1-209ENST00000613547 TMEM132DQ14C87 1099 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 NAB2Q15742 525 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 NFIL3Q16649 462 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 EDRF1Q3B7T1 1238 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 CCDC183Q5T5S1 534 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 JADE1Q6IE81 842 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 CBWD2Q8IUF1 395 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 MLKLQ8NB16 471 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 BEST2Q8NFU1 509 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 GDPD5Q8WTR4 605 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 IGSF21Q96ID5 467 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 FBXL18Q96ME1 805 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 ZMAT2Q96NC0 199 aaKnown RBP14.39□□□□□ -0.11
MDC1-209ENST00000613547 FNBP1Q96RU3 617 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 ALG13Q9NP73 1137 aaKnown RBP14.39□□□□□ -0.11
MDC1-209ENST00000613547 DACH1Q9UI36 760 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 LZTS1Q9Y250 596 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 C2CD2Q9Y426 696 aa14.39□□□□□ -0.11
MDC1-209ENST00000613547 MEFVO15553 781 aaPredicted RBP14.38□□□□□ -0.11
MDC1-209ENST00000613547 B4GALT3O60512 393 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 CCNE1P24864 410 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 RPL9P32969 192 aaKnown RBP14.38□□□□□ -0.11
MDC1-209ENST00000613547 SPAG1Q07617 926 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 ADAM9Q13443 819 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 SKOR2Q2VWA4 1001 aaPredicted RBP14.38□□□□□ -0.11
MDC1-209ENST00000613547 ZCWPW2Q504Y3 356 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 CEP135Q66GS9 1140 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 CENPPQ6IPU0 288 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 KLHL10Q6JEL2 608 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 DCLRE1AQ6PJP8 1040 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 USP37Q86T82 979 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 RDH13Q8NBN7 331 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 CACTINQ8WUQ7 758 aaKnown RBP14.38□□□□□ -0.11
MDC1-209ENST00000613547 CDX2Q99626 313 aaPredicted RBP14.38□□□□□ -0.11
MDC1-209ENST00000613547 CXCL16Q9H2A7 254 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 DMAC2Q9NW81 257 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 MTMR10Q9NXD2 777 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 LMCD1Q9NZU5 365 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 GBF1Q92538 1859 aa14.38□□□□□ -0.11
MDC1-209ENST00000613547 EPOPA6NHQ4 379 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 RFXAPO00287 272 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 PODXLO00592 558 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 CETN3O15182 167 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 GRM6O15303 877 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 TADA2AO75478 443 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 NFICP08651 508 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 TMEM191BP0C7N4 346 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 BMP6P22004 513 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 KCNA4P22459 653 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 IGFBP4P22692 258 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 FKBP3Q00688 224 aaKnown RBP14.37□□□□□ -0.11
MDC1-209ENST00000613547 PAK1Q13153 545 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 ZBTB6Q15916 424 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 PDE12Q6L8Q7 609 aaKnown RBP14.37□□□□□ -0.11
MDC1-209ENST00000613547 SASS6Q6UVJ0 657 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 ZSWIM2Q8NEG5 633 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 MICAL1Q8TDZ2 1067 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 POF1BQ8WVV4 589 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 NELFBQ8WX92 580 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 MYLIPQ8WY64 445 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 C18orf25Q96B23 403 aaPredicted RBP14.37□□□□□ -0.11
MDC1-209ENST00000613547 MRPL38Q96DV4 380 aaKnown RBP14.37□□□□□ -0.11
MDC1-209ENST00000613547 PDE11AQ9HCR9 933 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 ADAM28Q9UKQ2 775 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 R3HCC1Q9Y3T6 440 aaKnown RBP14.37□□□□□ -0.11
MDC1-209ENST00000613547 NUB1Q9Y5A7 615 aa14.37□□□□□ -0.11
MDC1-209ENST00000613547 SF3B1O75533 1304 aaKnown RBP eCLIP14.37□□□□□ -0.11
MDC1-209ENST00000613547 FNDC1Q4ZHG4 1894 aaPredicted RBP14.36□□□□□ -0.11
MDC1-209ENST00000613547 PPP1R3GB7ZBB8 358 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 TMEM189-UBE2V1I3L0A0 370 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 MAPK13O15264 365 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 TRAPPC3O43617 180 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 LPXNO60711 386 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 B3GAT3O94766 335 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 KRT13P13646 458 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 FOSL2P15408 326 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 TNNI1P19237 187 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 PSMC2P35998 433 aaKnown RBP14.36□□□□□ -0.11
MDC1-209ENST00000613547 CLCNKBP51801 687 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 TFAMQ00059 246 aaKnown RBP14.36□□□□□ -0.11
MDC1-209ENST00000613547 SOX4Q06945 474 aaPredicted RBP14.36□□□□□ -0.11
MDC1-209ENST00000613547 CYP24A1Q07973 514 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 ELAVL2Q12926 359 aaKnown RBP14.36□□□□□ -0.11
MDC1-209ENST00000613547 PSMD6Q15008 389 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 UPP1Q16831 310 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 KLHL40Q2TBA0 621 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 TIGD5Q53EQ6 642 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 SPATA1Q5VX52 437 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 FOXR2Q6PJQ5 311 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 DDX53Q86TM3 631 aaKnown RBP14.36□□□□□ -0.11
MDC1-209ENST00000613547 TMEM173Q86WV6 379 aaPredicted RBP14.36□□□□□ -0.11
MDC1-209ENST00000613547 WDR49Q8IV35 697 aa14.36□□□□□ -0.11
MDC1-209ENST00000613547 SPPL3Q8TCT6 385 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms