RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 MTRRQ9UBK8 725 aa17.42■□□□□ 0.38
HDDC2-210ENST00000609574 USP18Q9UMW8 372 aa17.42■□□□□ 0.38
HDDC2-210ENST00000609574 SMG5Q9UPR3 1016 aaKnown RBP17.42■□□□□ 0.38
HDDC2-210ENST00000609574 BACE2Q9Y5Z0 518 aa17.42■□□□□ 0.38
HDDC2-210ENST00000609574 A0A087WWV3 80 aa17.41■□□□□ 0.38
HDDC2-210ENST00000609574 PTGESO14684 152 aa17.41■□□□□ 0.38
HDDC2-210ENST00000609574 ADAM12O43184 909 aa17.41■□□□□ 0.38
HDDC2-210ENST00000609574 EFNA5P52803 228 aa17.41■□□□□ 0.38
HDDC2-210ENST00000609574 ADCY1Q08828 1119 aa17.41■□□□□ 0.38
HDDC2-210ENST00000609574 EARS2Q5JPH6 523 aaKnown RBP17.41■□□□□ 0.38
HDDC2-210ENST00000609574 CLDN23Q96B33 292 aa17.41■□□□□ 0.38
HDDC2-210ENST00000609574 BRD9Q9H8M2 597 aa17.41■□□□□ 0.38
HDDC2-210ENST00000609574 HCFC1R1Q9NWW0 138 aa17.41■□□□□ 0.38
HDDC2-210ENST00000609574 DCHS1Q96JQ0 3298 aa17.41■□□□□ 0.38
HDDC2-210ENST00000609574 OTOGLQ3ZCN5 2332 aa17.41■□□□□ 0.38
HDDC2-210ENST00000609574 TMEM189-UBE2V1I3L0A0 370 aa17.4■□□□□ 0.38
HDDC2-210ENST00000609574 RHOP08100 348 aa17.4■□□□□ 0.38
HDDC2-210ENST00000609574 NAMPTP43490 491 aa17.4■□□□□ 0.38
HDDC2-210ENST00000609574 SAFBQ15424 915 aaKnown RBP eCLIP17.4■□□□□ 0.38
HDDC2-210ENST00000609574 CYP4A22Q5TCH4 519 aa17.4■□□□□ 0.38
HDDC2-210ENST00000609574 PADI6Q6TGC4 694 aa17.4■□□□□ 0.38
HDDC2-210ENST00000609574 ZBTB44Q8NCP5 570 aa17.4■□□□□ 0.38
HDDC2-210ENST00000609574 DNASE1L2Q92874 299 aa17.4■□□□□ 0.38
HDDC2-210ENST00000609574 ELSPBP1Q96BH3 223 aa17.4■□□□□ 0.38
HDDC2-210ENST00000609574 DDX27Q96GQ7 796 aaKnown RBP17.4■□□□□ 0.38
HDDC2-210ENST00000609574 EPC1Q9H2F5 836 aa17.4■□□□□ 0.38
HDDC2-210ENST00000609574 ZFP14Q9HCL3 533 aa17.4■□□□□ 0.38
HDDC2-210ENST00000609574 TOPORSQ9NS56 1045 aaPredicted RBP17.4■□□□□ 0.38
HDDC2-210ENST00000609574 DOCK8Q8NF50 2099 aa17.4■□□□□ 0.38
HDDC2-210ENST00000609574 TDRD15B5MCY1 1934 aaKnown RBP17.39■□□□□ 0.37
HDDC2-210ENST00000609574 MTCL1Q9Y4B5 1905 aaKnown RBP17.39■□□□□ 0.37
HDDC2-210ENST00000609574 CEP250Q9BV73 2442 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 CACNA1IQ9P0X4 2223 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 FAM205CA6NFA0 338 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 H7C4K7 107 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 TARSP26639 723 aaKnown RBP17.39■□□□□ 0.37
HDDC2-210ENST00000609574 CLCNKBP51801 687 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 IQCEQ6IPM2 695 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 CATSPER3Q86XQ3 398 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 ZNF461Q8TAF7 563 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 IRF7Q92985 503 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 MTMR9Q96QG7 549 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 IER2Q9BTL4 223 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 POLR3CQ9BUI4 534 aaPredicted RBP17.39■□□□□ 0.37
HDDC2-210ENST00000609574 TRMT61BQ9BVS5 477 aaKnown RBP17.39■□□□□ 0.37
HDDC2-210ENST00000609574 CCDC94Q9BW85 323 aaPredicted RBP17.39■□□□□ 0.37
HDDC2-210ENST00000609574 AVENQ9NQS1 362 aaPredicted RBP17.39■□□□□ 0.37
HDDC2-210ENST00000609574 HEBP1Q9NRV9 189 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 SLC38A7Q9NVC3 462 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 TPCN1Q9ULQ1 816 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 NCOR2Q9Y618 2525 aa17.39■□□□□ 0.37
HDDC2-210ENST00000609574 CYP11B2P19099 503 aa17.38■□□□□ 0.37
HDDC2-210ENST00000609574 ATXN1P54253 815 aaKnown RBP17.38■□□□□ 0.37
HDDC2-210ENST00000609574 ARPP19P56211 112 aa17.38■□□□□ 0.37
HDDC2-210ENST00000609574 ATF7IP2Q5U623 682 aa17.38■□□□□ 0.37
HDDC2-210ENST00000609574 TANGO2Q6ICL3 276 aa17.38■□□□□ 0.37
HDDC2-210ENST00000609574 PDZD4Q76G19 769 aaPredicted RBP17.38■□□□□ 0.37
HDDC2-210ENST00000609574 DIS3L2Q8IYB7 885 aaKnown RBP17.38■□□□□ 0.37
HDDC2-210ENST00000609574 CORO1BQ9BR76 489 aa17.38■□□□□ 0.37
HDDC2-210ENST00000609574 RTKNQ9BST9 563 aa17.38■□□□□ 0.37
HDDC2-210ENST00000609574 CYP4F11Q9HBI6 524 aa17.38■□□□□ 0.37
HDDC2-210ENST00000609574 NDRG2Q9UN36 371 aaKnown RBP17.38■□□□□ 0.37
HDDC2-210ENST00000609574 BTBD18B2RXH4 712 aa17.37■□□□□ 0.37
HDDC2-210ENST00000609574 K7ERI5 159 aa17.37■□□□□ 0.37
HDDC2-210ENST00000609574 LILRB5O75023 590 aa17.37■□□□□ 0.37
HDDC2-210ENST00000609574 SPATA31C1P0DKV0 1188 aa17.37■□□□□ 0.37
HDDC2-210ENST00000609574 TKTP29401 623 aaKnown RBP17.37■□□□□ 0.37
HDDC2-210ENST00000609574 MCM7P33993 719 aa17.37■□□□□ 0.37
HDDC2-210ENST00000609574 NAB2Q15742 525 aa17.37■□□□□ 0.37
HDDC2-210ENST00000609574 UPP1Q16831 310 aa17.37■□□□□ 0.37
HDDC2-210ENST00000609574 GLRA4Q5JXX5 417 aa17.37■□□□□ 0.37
HDDC2-210ENST00000609574 TSSK4Q6SA08 328 aa17.37■□□□□ 0.37
HDDC2-210ENST00000609574 CELF5Q8N6W0 485 aaKnown RBP17.37■□□□□ 0.37
HDDC2-210ENST00000609574 KIFAP3Q92845 792 aa17.37■□□□□ 0.37
HDDC2-210ENST00000609574 TNFRSF25Q93038 417 aa17.37■□□□□ 0.37
HDDC2-210ENST00000609574 ZNF512Q96ME7 567 aaPredicted RBP17.37■□□□□ 0.37
HDDC2-210ENST00000609574 PPP1R10Q96QC0 940 aaKnown RBP17.37■□□□□ 0.37
HDDC2-210ENST00000609574 NUB1Q9Y5A7 615 aa17.37■□□□□ 0.37
HDDC2-210ENST00000609574 GPR179Q6PRD1 2367 aa17.36■□□□□ 0.37
HDDC2-210ENST00000609574 ARHGEF37A1IGU5 675 aa17.36■□□□□ 0.37
HDDC2-210ENST00000609574 MICAL2O94851 1124 aa17.36■□□□□ 0.37
HDDC2-210ENST00000609574 RPA1P27694 616 aa17.36■□□□□ 0.37
HDDC2-210ENST00000609574 CCR3P51677 355 aa17.36■□□□□ 0.37
HDDC2-210ENST00000609574 MTAPQ13126 283 aa17.36■□□□□ 0.37
HDDC2-210ENST00000609574 HAUS3Q68CZ6 603 aa17.36■□□□□ 0.37
HDDC2-210ENST00000609574 PLA2G2FQ9BZM2 168 aa17.36■□□□□ 0.37
HDDC2-210ENST00000609574 DMXL1Q9Y485 3027 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 SMIM28A0A1B0GU29 152 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 TTLL13PA6NNM8 815 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 I3L4J1 428 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 SYN3O14994 580 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 MED24O75448 989 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 CTDNEP1O95476 244 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 ATF2P15336 505 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 CEBPBP17676 345 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 MUTP22033 750 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 MARCKSP29966 332 aaPredicted RBP17.35■□□□□ 0.37
HDDC2-210ENST00000609574 FOSBP53539 338 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 ROR1Q01973 937 aa17.35■□□□□ 0.37
HDDC2-210ENST00000609574 EEF1DP3Q658K8 133 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms