RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 MTRRQ9UBK8 725 aa17.42■□□□□ 0.38
HDDC2-203ENST00000608284 USP18Q9UMW8 372 aa17.42■□□□□ 0.38
HDDC2-203ENST00000608284 SMG5Q9UPR3 1016 aaKnown RBP17.42■□□□□ 0.38
HDDC2-203ENST00000608284 BACE2Q9Y5Z0 518 aa17.42■□□□□ 0.38
HDDC2-203ENST00000608284 A0A087WWV3 80 aa17.41■□□□□ 0.38
HDDC2-203ENST00000608284 PTGESO14684 152 aa17.41■□□□□ 0.38
HDDC2-203ENST00000608284 ADAM12O43184 909 aa17.41■□□□□ 0.38
HDDC2-203ENST00000608284 EFNA5P52803 228 aa17.41■□□□□ 0.38
HDDC2-203ENST00000608284 ADCY1Q08828 1119 aa17.41■□□□□ 0.38
HDDC2-203ENST00000608284 EARS2Q5JPH6 523 aaKnown RBP17.41■□□□□ 0.38
HDDC2-203ENST00000608284 CLDN23Q96B33 292 aa17.41■□□□□ 0.38
HDDC2-203ENST00000608284 BRD9Q9H8M2 597 aa17.41■□□□□ 0.38
HDDC2-203ENST00000608284 HCFC1R1Q9NWW0 138 aa17.41■□□□□ 0.38
HDDC2-203ENST00000608284 DCHS1Q96JQ0 3298 aa17.41■□□□□ 0.38
HDDC2-203ENST00000608284 OTOGLQ3ZCN5 2332 aa17.41■□□□□ 0.38
HDDC2-203ENST00000608284 TMEM189-UBE2V1I3L0A0 370 aa17.4■□□□□ 0.38
HDDC2-203ENST00000608284 RHOP08100 348 aa17.4■□□□□ 0.38
HDDC2-203ENST00000608284 NAMPTP43490 491 aa17.4■□□□□ 0.38
HDDC2-203ENST00000608284 SAFBQ15424 915 aaKnown RBP eCLIP17.4■□□□□ 0.38
HDDC2-203ENST00000608284 CYP4A22Q5TCH4 519 aa17.4■□□□□ 0.38
HDDC2-203ENST00000608284 PADI6Q6TGC4 694 aa17.4■□□□□ 0.38
HDDC2-203ENST00000608284 ZBTB44Q8NCP5 570 aa17.4■□□□□ 0.38
HDDC2-203ENST00000608284 DNASE1L2Q92874 299 aa17.4■□□□□ 0.38
HDDC2-203ENST00000608284 ELSPBP1Q96BH3 223 aa17.4■□□□□ 0.38
HDDC2-203ENST00000608284 DDX27Q96GQ7 796 aaKnown RBP17.4■□□□□ 0.38
HDDC2-203ENST00000608284 EPC1Q9H2F5 836 aa17.4■□□□□ 0.38
HDDC2-203ENST00000608284 ZFP14Q9HCL3 533 aa17.4■□□□□ 0.38
HDDC2-203ENST00000608284 TOPORSQ9NS56 1045 aaPredicted RBP17.4■□□□□ 0.38
HDDC2-203ENST00000608284 DOCK8Q8NF50 2099 aa17.4■□□□□ 0.38
HDDC2-203ENST00000608284 TDRD15B5MCY1 1934 aaKnown RBP17.39■□□□□ 0.37
HDDC2-203ENST00000608284 MTCL1Q9Y4B5 1905 aaKnown RBP17.39■□□□□ 0.37
HDDC2-203ENST00000608284 CEP250Q9BV73 2442 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 CACNA1IQ9P0X4 2223 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 FAM205CA6NFA0 338 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 H7C4K7 107 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 TARSP26639 723 aaKnown RBP17.39■□□□□ 0.37
HDDC2-203ENST00000608284 CLCNKBP51801 687 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 IQCEQ6IPM2 695 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 CATSPER3Q86XQ3 398 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 ZNF461Q8TAF7 563 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 IRF7Q92985 503 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 MTMR9Q96QG7 549 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 IER2Q9BTL4 223 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 POLR3CQ9BUI4 534 aaPredicted RBP17.39■□□□□ 0.37
HDDC2-203ENST00000608284 TRMT61BQ9BVS5 477 aaKnown RBP17.39■□□□□ 0.37
HDDC2-203ENST00000608284 CCDC94Q9BW85 323 aaPredicted RBP17.39■□□□□ 0.37
HDDC2-203ENST00000608284 AVENQ9NQS1 362 aaPredicted RBP17.39■□□□□ 0.37
HDDC2-203ENST00000608284 HEBP1Q9NRV9 189 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 SLC38A7Q9NVC3 462 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 TPCN1Q9ULQ1 816 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 NCOR2Q9Y618 2525 aa17.39■□□□□ 0.37
HDDC2-203ENST00000608284 CYP11B2P19099 503 aa17.38■□□□□ 0.37
HDDC2-203ENST00000608284 ATXN1P54253 815 aaKnown RBP17.38■□□□□ 0.37
HDDC2-203ENST00000608284 ARPP19P56211 112 aa17.38■□□□□ 0.37
HDDC2-203ENST00000608284 ATF7IP2Q5U623 682 aa17.38■□□□□ 0.37
HDDC2-203ENST00000608284 TANGO2Q6ICL3 276 aa17.38■□□□□ 0.37
HDDC2-203ENST00000608284 PDZD4Q76G19 769 aaPredicted RBP17.38■□□□□ 0.37
HDDC2-203ENST00000608284 DIS3L2Q8IYB7 885 aaKnown RBP17.38■□□□□ 0.37
HDDC2-203ENST00000608284 CORO1BQ9BR76 489 aa17.38■□□□□ 0.37
HDDC2-203ENST00000608284 RTKNQ9BST9 563 aa17.38■□□□□ 0.37
HDDC2-203ENST00000608284 CYP4F11Q9HBI6 524 aa17.38■□□□□ 0.37
HDDC2-203ENST00000608284 NDRG2Q9UN36 371 aaKnown RBP17.38■□□□□ 0.37
HDDC2-203ENST00000608284 BTBD18B2RXH4 712 aa17.37■□□□□ 0.37
HDDC2-203ENST00000608284 K7ERI5 159 aa17.37■□□□□ 0.37
HDDC2-203ENST00000608284 LILRB5O75023 590 aa17.37■□□□□ 0.37
HDDC2-203ENST00000608284 SPATA31C1P0DKV0 1188 aa17.37■□□□□ 0.37
HDDC2-203ENST00000608284 TKTP29401 623 aaKnown RBP17.37■□□□□ 0.37
HDDC2-203ENST00000608284 MCM7P33993 719 aa17.37■□□□□ 0.37
HDDC2-203ENST00000608284 NAB2Q15742 525 aa17.37■□□□□ 0.37
HDDC2-203ENST00000608284 UPP1Q16831 310 aa17.37■□□□□ 0.37
HDDC2-203ENST00000608284 GLRA4Q5JXX5 417 aa17.37■□□□□ 0.37
HDDC2-203ENST00000608284 TSSK4Q6SA08 328 aa17.37■□□□□ 0.37
HDDC2-203ENST00000608284 CELF5Q8N6W0 485 aaKnown RBP17.37■□□□□ 0.37
HDDC2-203ENST00000608284 KIFAP3Q92845 792 aa17.37■□□□□ 0.37
HDDC2-203ENST00000608284 TNFRSF25Q93038 417 aa17.37■□□□□ 0.37
HDDC2-203ENST00000608284 ZNF512Q96ME7 567 aaPredicted RBP17.37■□□□□ 0.37
HDDC2-203ENST00000608284 PPP1R10Q96QC0 940 aaKnown RBP17.37■□□□□ 0.37
HDDC2-203ENST00000608284 NUB1Q9Y5A7 615 aa17.37■□□□□ 0.37
HDDC2-203ENST00000608284 GPR179Q6PRD1 2367 aa17.36■□□□□ 0.37
HDDC2-203ENST00000608284 ARHGEF37A1IGU5 675 aa17.36■□□□□ 0.37
HDDC2-203ENST00000608284 MICAL2O94851 1124 aa17.36■□□□□ 0.37
HDDC2-203ENST00000608284 RPA1P27694 616 aa17.36■□□□□ 0.37
HDDC2-203ENST00000608284 CCR3P51677 355 aa17.36■□□□□ 0.37
HDDC2-203ENST00000608284 MTAPQ13126 283 aa17.36■□□□□ 0.37
HDDC2-203ENST00000608284 HAUS3Q68CZ6 603 aa17.36■□□□□ 0.37
HDDC2-203ENST00000608284 PLA2G2FQ9BZM2 168 aa17.36■□□□□ 0.37
HDDC2-203ENST00000608284 DMXL1Q9Y485 3027 aa17.35■□□□□ 0.37
HDDC2-203ENST00000608284 SMIM28A0A1B0GU29 152 aa17.35■□□□□ 0.37
HDDC2-203ENST00000608284 TTLL13PA6NNM8 815 aa17.35■□□□□ 0.37
HDDC2-203ENST00000608284 I3L4J1 428 aa17.35■□□□□ 0.37
HDDC2-203ENST00000608284 SYN3O14994 580 aa17.35■□□□□ 0.37
HDDC2-203ENST00000608284 MED24O75448 989 aa17.35■□□□□ 0.37
HDDC2-203ENST00000608284 CTDNEP1O95476 244 aa17.35■□□□□ 0.37
HDDC2-203ENST00000608284 ATF2P15336 505 aa17.35■□□□□ 0.37
HDDC2-203ENST00000608284 CEBPBP17676 345 aa17.35■□□□□ 0.37
HDDC2-203ENST00000608284 MUTP22033 750 aa17.35■□□□□ 0.37
HDDC2-203ENST00000608284 MARCKSP29966 332 aaPredicted RBP17.35■□□□□ 0.37
HDDC2-203ENST00000608284 FOSBP53539 338 aa17.35■□□□□ 0.37
HDDC2-203ENST00000608284 ROR1Q01973 937 aa17.35■□□□□ 0.37
HDDC2-203ENST00000608284 EEF1DP3Q658K8 133 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms