RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PRPF31Q8WWY3 499 aaKnown RBP12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 SHC3Q92529 594 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 RNF25Q96BH1 459 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 IMPG2Q9BZV3 1241 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 RAB17Q9H0T7 212 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 PSD3Q9NYI0 1048 aa12.34□□□□□ -0.43
ARHGEF1-220ENST00000600274 C19orf81C9J6K1 198 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 WEE2P0C1S8 567 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 ATP4AP20648 1035 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 RDXP35241 583 aaKnown RBP12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 CUL1Q13616 776 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 CCDC38Q502W7 563 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 SGO2Q562F6 1265 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 HP1BP3Q5SSJ5 553 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 MMS22LQ6ZRQ5 1243 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 TEX2Q8IWB9 1127 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 IQCKQ8N0W5 287 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 ATP8B4Q8TF62 1192 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 CARD9Q9H257 536 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 RNF181Q9P0P0 153 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 RASAL2Q9UJF2 1139 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 MTUS1Q9ULD2 1270 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 FAM169AQ9Y6X4 670 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 NCANO14594 1321 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 ATF7P17544 494 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 GNA15P30679 374 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 MAGOHP61326 146 aaKnown RBP12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 MTM1Q13496 603 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 UAP1Q16222 522 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 UBAP2Q5T6F2 1119 aaKnown RBP12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 VPS33BQ9H267 617 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 GOLGA8SH3BPF8 625 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 FZD9O00144 591 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 HGSO14964 777 aaPredicted RBP12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 ACSL3O95573 720 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 ANXA13P27216 316 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 CEP120Q8N960 986 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 REPS2Q8NFH8 660 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 MDM1Q8TC05 714 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 PIK3R5Q8WYR1 880 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 CALR3Q96L12 384 aaKnown RBP12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 ATP6V1G3Q96LB4 118 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 MTMR12Q9C0I1 747 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 ADAM22Q9P0K1 906 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 TMEM59LQ9UK28 342 aa12.33□□□□□ -0.44
ARHGEF1-220ENST00000600274 USP2O75604 605 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 RFX1P22670 979 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 ALDH5A1P51649 535 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 RWDD2BP57060 319 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 HSDL1Q3SXM5 330 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 TTC27Q6P3X3 843 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 GSTA5Q7RTV2 222 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 PRELID2Q8N945 189 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 MGARPQ8TDB4 240 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 ERP44Q9BS26 406 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 SYT11Q9BT88 431 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 SLITRK6Q9H5Y7 841 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 DNAH12Q6ZR08 3092 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 SPATA31C2B4DYI2 1134 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 PIK3R2O00459 728 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 P4HA2O15460 535 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 EXTL3O43909 919 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 SHBGP04278 402 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 EDN1P05305 212 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 CLCN3P51790 818 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 TRPC3Q13507 836 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 MYBPC2Q14324 1141 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 PWWP2AQ96N64 755 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 RNF19AQ9NV58 838 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 NENFQ9UMX5 172 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 SYNGAP1Q96PV0 1343 aa12.32□□□□□ -0.44
ARHGEF1-220ENST00000600274 RARAP10276 462 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 NOP14P78316 857 aaKnown RBP12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 PLCB3Q01970 1234 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 TADA2BQ86TJ2 420 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 ZDHHC14Q8IZN3 488 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 ADAM33Q9BZ11 813 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 HAPLN2Q9GZV7 340 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 SPATC1LQ9H0A9 340 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 MLXIPLQ9NP71 852 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 NRBP2Q9NSY0 501 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 MAP3K20Q9NYL2 800 aaKnown RBP12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 AFG3L2Q9Y4W6 797 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 GSTTP1A0A1W2PQM5 241 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 MAFGO15525 162 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 FDX1P10109 184 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 ECHS1P30084 290 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 IFNAR2P48551 515 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 PTENP60484 403 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 ZNF844Q08AG5 666 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 CALCOCO2Q13137 446 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 NCOA4Q13772 614 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 ATP13A4Q4VNC1 1196 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 DENND2CQ68D51 928 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 ACAD10Q6JQN1 1059 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 RBBP8NLQ8NC74 664 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 TIPINQ9BVW5 301 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 FAM114A2Q9NRY5 505 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 POTEJP0CG39 1038 aa12.31□□□□□ -0.44
ARHGEF1-220ENST00000600274 PSMC4P43686 418 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms