RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 ZNF687Q8N1G0 1237 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 C12orf50Q8NA57 414 aaPredicted RBP11.3□□□□□ -0.6
SDF2-209ENST00000591903 SMG8Q8ND04 991 aaKnown RBP11.3□□□□□ -0.6
SDF2-209ENST00000591903 PSPC1Q8WXF1 523 aaKnown RBP11.3□□□□□ -0.6
SDF2-209ENST00000591903 SLC7A3Q8WY07 619 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 SLC5A5Q92911 643 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 ELSPBP1Q96BH3 223 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 B3GALT6Q96L58 329 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 UNC45AQ9H3U1 944 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 KCNMB3Q9NPA1 279 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 CHMP5Q9NZZ3 219 aa11.3□□□□□ -0.6
SDF2-209ENST00000591903 NDRG2Q9UN36 371 aaKnown RBP11.3□□□□□ -0.6
SDF2-209ENST00000591903 VWA8A3KMH1 1905 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 TMEM8BA6NDV4 472 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 DDX11L8A8MPP1 907 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 F8W810 466 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 TM4SF5O14894 197 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 CCL16O15467 120 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 ASAP2O43150 1006 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 EDIL3O43854 480 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 NEMFO60524 1076 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 TADA2AO75478 443 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 STBD1O95210 358 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 PAPSS2O95340 614 aaPredicted RBP11.29□□□□□ -0.6
SDF2-209ENST00000591903 PRPHP41219 470 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 GRIK3Q13003 919 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 EARS2Q5JPH6 523 aaKnown RBP11.29□□□□□ -0.6
SDF2-209ENST00000591903 TTC38Q5R3I4 469 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 ARL6IP4Q66PJ3 421 aaKnown RBP11.29□□□□□ -0.6
SDF2-209ENST00000591903 NOTUMQ6P988 496 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 C1orf228Q6PIY5 440 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 UNQ6494/PRO21346Q6UXR6 183 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 LONP2Q86WA8 852 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 PIK3R5Q8WYR1 880 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 IRF7Q92985 503 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 ZNF396Q96N95 335 aaPredicted RBP11.29□□□□□ -0.6
SDF2-209ENST00000591903 TTPALQ9BTX7 342 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 TRIM6Q9C030 488 aaPredicted RBP11.29□□□□□ -0.6
SDF2-209ENST00000591903 TRPV5Q9NQA5 729 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 AVENQ9NQS1 362 aaPredicted RBP11.29□□□□□ -0.6
SDF2-209ENST00000591903 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.29□□□□□ -0.6
SDF2-209ENST00000591903 DDX25Q9UHL0 483 aaKnown RBP11.29□□□□□ -0.6
SDF2-209ENST00000591903 ZMIZ1Q9ULJ6 1067 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 MRPS23Q9Y3D9 190 aaKnown RBP11.29□□□□□ -0.6
SDF2-209ENST00000591903 ARID2Q68CP9 1835 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 CEP295Q9C0D2 2601 aa11.29□□□□□ -0.6
SDF2-209ENST00000591903 TMEM150BA6NC51 233 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 SHISA7A6NL88 538 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 HRO43593 1189 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 CCNT1O60563 726 aaKnown RBP11.28□□□□□ -0.6
SDF2-209ENST00000591903 DKC1O60832 514 aaKnown RBP eCLIP11.28□□□□□ -0.6
SDF2-209ENST00000591903 PSMD10O75832 226 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 SRGAP2CP0DJJ0 459 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 PSMC5P62195 406 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 ELAVL2Q12926 359 aaKnown RBP11.28□□□□□ -0.6
SDF2-209ENST00000591903 PSMD5Q16401 504 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 RTP2Q5QGT7 225 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 AXDND1Q5T1B0 1012 aaPredicted RBP11.28□□□□□ -0.6
SDF2-209ENST00000591903 PRSS55Q6UWB4 352 aaPredicted RBP11.28□□□□□ -0.6
SDF2-209ENST00000591903 SPEM1Q8N4L4 309 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 KDF1Q8NAX2 398 aaPredicted RBP11.28□□□□□ -0.6
SDF2-209ENST00000591903 SLC7A14Q8TBB6 771 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 ETNPPLQ8TBG4 499 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 TCP11Q8WWU5 503 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 FAM3CQ92520 227 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 MSANTD3Q96H12 275 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 LOXL4Q96JB6 756 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 ZFP42Q96MM3 310 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 CLSTN3Q9BQT9 956 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 SH2D3AQ9BRG2 576 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 BRD9Q9H8M2 597 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 LMAN1LQ9HAT1 526 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 MIOSQ9NXC5 875 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 DNMT3BQ9UBC3 853 aaKnown RBP11.28□□□□□ -0.6
SDF2-209ENST00000591903 CFAP45Q9UL16 551 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 STK24Q9Y6E0 443 aa11.28□□□□□ -0.6
SDF2-209ENST00000591903 ANKRD11Q6UB99 2663 aaPredicted RBP11.28□□□□□ -0.6
SDF2-209ENST00000591903 SPEGQ15772 3267 aa11.27□□□□□ -0.6
SDF2-209ENST00000591903 SOBPA7XYQ1 873 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 SLC26A4O43511 780 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 DTNBO60941 627 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 BAG4O95429 457 aaKnown RBP11.27□□□□□ -0.61
SDF2-209ENST00000591903 YEATS4O95619 227 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 ZNF806P0C7X5 589 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
SDF2-209ENST00000591903 RFC5P40937 340 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 NASPP49321 788 aaPredicted RBP11.27□□□□□ -0.61
SDF2-209ENST00000591903 TOB1P50616 345 aaPredicted RBP11.27□□□□□ -0.61
SDF2-209ENST00000591903 FOSBP53539 338 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 MLLT6P55198 1093 aaPredicted RBP11.27□□□□□ -0.61
SDF2-209ENST00000591903 ATP2C1P98194 919 aaPredicted RBP11.27□□□□□ -0.61
SDF2-209ENST00000591903 SATB1Q01826 763 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 LAMTOR4Q0VGL1 99 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 LRRC32Q14392 662 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 HSP90AA2PQ14568 343 aaPredicted RBP11.27□□□□□ -0.61
SDF2-209ENST00000591903 ANO5Q75V66 913 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 CEP68Q76N32 757 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 KCTD17Q8N5Z5 321 aa11.27□□□□□ -0.61
SDF2-209ENST00000591903 FAM160A2Q8N612 972 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms