RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 IFNB1P01574 187 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 LY6KQ17RY6 165 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 BRI3BPQ8WY22 251 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 NECTIN4Q96NY8 510 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 NUDCD1Q96RS6 583 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 SPATA16Q9BXB7 569 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 ZWILCHQ9H900 591 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 DPP3Q9NY33 737 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 POTEMA6NI47 508 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 PSMD3O43242 534 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 FBXO21O94952 628 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 SGPL1O95470 568 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 NR3C1P04150 777 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 MTSS1LQ765P7 747 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 CCDC105Q8IYK2 499 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 DDI1Q8WTU0 396 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 TIGD1Q96MW7 591 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 NFKBIZQ9BYH8 718 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 PTPN22Q9Y2R2 807 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 NFASCO94856 1347 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 TBC1D3BA6NDS4 549 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 ADH1CP00326 375 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 ATP1A1P05023 1023 aaKnown RBP12.13□□□□□ -0.47
SEH1L-208ENST00000590843 ACLYP53396 1101 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 NAALADL2Q58DX5 795 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 POLMQ9NP87 494 aaPredicted RBP12.13□□□□□ -0.47
SEH1L-208ENST00000590843 FRMD3A2A2Y4 597 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 PDE2AO00408 941 aaPredicted RBP12.13□□□□□ -0.47
SEH1L-208ENST00000590843 HSF2BPO75031 334 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 TUBBP07437 444 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 PHEXP78562 749 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 SEPT6Q14141 434 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 SUZ12Q15022 739 aaKnown RBP12.13□□□□□ -0.47
SEH1L-208ENST00000590843 KNOP1Q1ED39 458 aaKnown RBP12.13□□□□□ -0.47
SEH1L-208ENST00000590843 SYTL3Q4VX76 610 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 PRAMEF19Q5SWL8 479 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 SDCCAG8Q86SQ7 713 aaPredicted RBP12.13□□□□□ -0.47
SEH1L-208ENST00000590843 FBXL13Q8NEE6 735 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 RPGRIP1Q96KN7 1286 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 ABCG4Q9H172 646 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 AK9Q5TCS8 1911 aa12.13□□□□□ -0.47
SEH1L-208ENST00000590843 VTNP04004 478 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 CACNB2Q08289 660 aaPredicted RBP12.12□□□□□ -0.47
SEH1L-208ENST00000590843 CCDC85BQ15834 202 aaPredicted RBP12.12□□□□□ -0.47
SEH1L-208ENST00000590843 TMEM86AQ8N2M4 240 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 PPTC7Q8NI37 304 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 BCO2Q9BYV7 579 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 GUCA1BQ9UMX6 200 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 GIT1Q9Y2X7 761 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 EXTL3O43909 919 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 POTEIP0CG38 1075 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 SREBF1P36956 1147 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 C10orf76Q5T2E6 689 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 POTEEQ6S8J3 1075 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 TMEM270Q6UE05 265 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 SLC24A5Q71RS6 500 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 CCDC25Q86WR0 208 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 POTEDQ86YR6 584 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 NPAS4Q8IUM7 802 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 VPS52Q8N1B4 723 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 AHCYL2Q96HN2 611 aaKnown RBP12.12□□□□□ -0.47
SEH1L-208ENST00000590843 ABHD8Q96I13 439 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 CALN1Q9BXU9 219 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 KCNQ5Q9NR82 932 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 APODP05090 189 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 HIRAP54198 1017 aaPredicted RBP12.12□□□□□ -0.47
SEH1L-208ENST00000590843 PTK2BQ14289 1009 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 KLHL40Q2TBA0 621 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 CYB5R4Q7L1T6 521 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 PLPPR4Q7Z2D5 763 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 TTC13Q8NBP0 860 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 TIFAQ96CG3 184 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 DTNBP1Q96EV8 351 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 CNOT6LQ96LI5 555 aaKnown RBP12.12□□□□□ -0.47
SEH1L-208ENST00000590843 SIK2Q9H0K1 926 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 CWC15Q9P013 229 aaKnown RBP12.12□□□□□ -0.47
SEH1L-208ENST00000590843 ZNF510Q9Y2H8 683 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 BAIAP3O94812 1187 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 NR5A1Q13285 461 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 TUBB2AQ13885 445 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 LBX2Q6XYB7 198 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 LEKR1Q6ZMV7 388 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 C4orf19Q8IY42 314 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 ARHGEF26Q96DR7 871 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 HPDLQ96IR7 371 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 SLC4A9Q96Q91 983 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 TUBB2BQ9BVA1 445 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 ARHGAP39Q9C0H5 1083 aa12.12□□□□□ -0.47
SEH1L-208ENST00000590843 TDP2O95551 362 aa12.11□□□□□ -0.47
SEH1L-208ENST00000590843 KRT1P04264 644 aa12.11□□□□□ -0.47
SEH1L-208ENST00000590843 HMBSP08397 361 aa12.11□□□□□ -0.47
SEH1L-208ENST00000590843 ALPPL2P10696 532 aa12.11□□□□□ -0.47
SEH1L-208ENST00000590843 MX2P20592 715 aa12.11□□□□□ -0.47
SEH1L-208ENST00000590843 SNW1Q13573 536 aaKnown RBP12.11□□□□□ -0.47
SEH1L-208ENST00000590843 ERAP2Q6P179 960 aa12.11□□□□□ -0.47
SEH1L-208ENST00000590843 TRMT2AQ8IZ69 625 aaKnown RBP12.11□□□□□ -0.47
SEH1L-208ENST00000590843 RANBP17Q9H2T7 1088 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms