RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 KNOP1Q1ED39 458 aaKnown RBP12.64□□□□□ -0.39
LRFN3-202ENST00000585876 TPRNQ4KMQ1 711 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 SEZ6Q53EL9 994 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 GLRA4Q5JXX5 417 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 HS2ST1Q7LGA3 356 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 BRSK2Q8IWQ3 736 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 GPR65Q8IYL9 337 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 GUF1Q8N442 669 aaKnown RBP12.64□□□□□ -0.39
LRFN3-202ENST00000585876 MAFAQ8NHW3 353 aaPredicted RBP12.64□□□□□ -0.39
LRFN3-202ENST00000585876 CBWD1Q9BRT8 395 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 KCTD10Q9H3F6 313 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 ASB7Q9H672 318 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 FAN1Q9Y2M0 1017 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 IRAK3Q9Y616 596 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 CUL9Q8IWT3 2517 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 TTC28Q96AY4 2481 aa12.64□□□□□ -0.39
LRFN3-202ENST00000585876 PDXKO00764 312 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 EXTL3O43909 919 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 PRPF40AO75400 957 aaKnown RBP12.63□□□□□ -0.39
LRFN3-202ENST00000585876 KIF20AO95235 890 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 IL18RAPO95256 599 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 SMC2O95347 1197 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 CYP3A5P20815 502 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 IGFBP4P22692 258 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 ACOT2P49753 483 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 NFIL3Q16649 462 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 UPP1Q16831 310 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 ARMCX5Q6P1M9 558 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 NT5DC4Q86YG4 428 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 SLC9A9Q8IVB4 645 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 PAAF1Q9BRP4 392 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 ZBP1Q9H171 429 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 NSUN3Q9H649 340 aaKnown RBP12.63□□□□□ -0.39
LRFN3-202ENST00000585876 RPF1Q9H9Y2 349 aaKnown RBP12.63□□□□□ -0.39
LRFN3-202ENST00000585876 KIAA1586Q9HCI6 787 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 NGRNQ9NPE2 291 aaKnown RBP12.63□□□□□ -0.39
LRFN3-202ENST00000585876 LMBRD1Q9NUN5 540 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 PUF60Q9UHX1 559 aaKnown RBP12.63□□□□□ -0.39
LRFN3-202ENST00000585876 ADAM28Q9UKQ2 775 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 PRG3Q9Y2Y8 225 aaPredicted RBP12.63□□□□□ -0.39
LRFN3-202ENST00000585876 C2CD2Q9Y426 696 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 PCDHA5Q9Y5H7 936 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 VCANP13611 3396 aa12.63□□□□□ -0.39
LRFN3-202ENST00000585876 FSD2A1L4K1 749 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 CASTOR2A6NHX0 329 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 LACTBL1A8MY62 500 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 NT5C1B-RDH14C9J2C7 533 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 XPOTO43592 962 aaKnown RBP12.62□□□□□ -0.39
LRFN3-202ENST00000585876 KIF4AO95239 1232 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 SOD2P04179 222 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 CTSAP10619 480 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 LRPAP1P30533 357 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 RPL9P32969 192 aaKnown RBP12.62□□□□□ -0.39
LRFN3-202ENST00000585876 IRS1P35568 1242 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 OR1G1P47890 313 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 ERVFC1P60507 584 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 MYBPC2Q14324 1141 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 ZCWPW2Q504Y3 356 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 ZNF658Q5TYW1 1059 aaPredicted RBP12.62□□□□□ -0.39
LRFN3-202ENST00000585876 GPD1LQ8N335 351 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 SMARCE1Q969G3 411 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 SAAL1Q96ER3 474 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 DDX27Q96GQ7 796 aaKnown RBP12.62□□□□□ -0.39
LRFN3-202ENST00000585876 FAM213AQ9BRX8 229 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 HERC2P3Q9BVR0 1158 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 COLEC11Q9BWP8 271 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 HSPBP1Q9NZL4 362 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 UBQLN1Q9UMX0 589 aaKnown RBP12.62□□□□□ -0.39
LRFN3-202ENST00000585876 TRAF3IP3Q9Y228 551 aa12.62□□□□□ -0.39
LRFN3-202ENST00000585876 SF3B1O75533 1304 aaKnown RBP eCLIP12.62□□□□□ -0.39
LRFN3-202ENST00000585876 F8W810 466 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 NFICP08651 508 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 CLCNKBP51801 687 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 SMC1AQ14683 1233 aaKnown RBP12.61□□□□□ -0.39
LRFN3-202ENST00000585876 SPATA1Q5VX52 437 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 DCLRE1AQ6PJP8 1040 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 CD300LGQ6UXG3 332 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 NELFCDQ8IXH7 590 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 VPS52Q8N1B4 723 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 C3orf58Q8NDZ4 430 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 ZSWIM2Q8NEG5 633 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 PPP2R3CQ969Q6 453 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 C18orf25Q96B23 403 aaPredicted RBP12.61□□□□□ -0.39
LRFN3-202ENST00000585876 KIF12Q96FN5 646 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 TCF25Q9BQ70 676 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 CHST7Q9NS84 486 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 DMAC2Q9NW81 257 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 RBAKQ9NYW8 714 aaPredicted RBP12.61□□□□□ -0.39
LRFN3-202ENST00000585876 CACNG4Q9UBN1 327 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 TUBGCP4Q9UGJ1 667 aa12.61□□□□□ -0.39
LRFN3-202ENST00000585876 NCK2O43639 380 aa12.6□□□□□ -0.39
LRFN3-202ENST00000585876 LILRB3O75022 631 aa12.6□□□□□ -0.39
LRFN3-202ENST00000585876 WNT7BP56706 349 aa12.6□□□□□ -0.39
LRFN3-202ENST00000585876 ELAVL2Q12926 359 aaKnown RBP12.6□□□□□ -0.39
LRFN3-202ENST00000585876 TMEM132DQ14C87 1099 aa12.6□□□□□ -0.39
LRFN3-202ENST00000585876 PTPN14Q15678 1187 aa12.6□□□□□ -0.39
LRFN3-202ENST00000585876 SNRNP35Q16560 246 aaKnown RBP12.6□□□□□ -0.39
LRFN3-202ENST00000585876 CTC1Q2NKJ3 1217 aa12.6□□□□□ -0.39
LRFN3-202ENST00000585876 EDRF1Q3B7T1 1238 aa12.6□□□□□ -0.39
LRFN3-202ENST00000585876 TCEAL5Q5H9L2 206 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms