RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 DPF2Q92785 391 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 TSR2Q969E8 191 aaKnown RBP3.2□□□□□ -1.9
COPS3-213ENST00000577210 RUNDC1Q96C34 613 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 SUCLG2Q96I99 432 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 LOXL4Q96JB6 756 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 MRGPRX4Q96LA9 322 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 LRGUKQ96M69 825 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 TAAR9Q96RI9 348 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 MRI1Q9BV20 369 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 PACSIN1Q9BY11 444 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 LMBRD1Q9NUN5 540 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 OBP2AQ9NY56 170 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 POGKQ9P215 609 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 ZDHHC8Q9ULC8 765 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 PCDHA13Q9Y5I0 950 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 DUSP10Q9Y6W6 482 aa3.2□□□□□ -1.9
COPS3-213ENST00000577210 CAPN8A6NHC0 703 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 VSTM5A8MXK1 200 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 TRIM24O15164 1050 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 FRS3O43559 492 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 PRICKLE3O43900 615 aaPredicted RBP3.19□□□□□ -1.9
COPS3-213ENST00000577210 MGEA5O60502 916 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 TUSC2O75896 110 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 HAUS5O94927 633 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 ZBED1O96006 694 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 CHEK2O96017 543 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 GNAI2P04899 355 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 HLA-DOAP06340 250 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 MALP21145 153 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 EDNRBP24530 442 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 SLC6A9P48067 706 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 ATP8B2P98198 1209 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 SATB1Q01826 763 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 TLE1Q04724 770 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 KRTAP1-1Q07627 177 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 DUSP8Q13202 625 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 CRHR2Q13324 411 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 IL10RAQ13651 578 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 SAFB2Q14151 953 aaKnown RBP eCLIP3.19□□□□□ -1.9
COPS3-213ENST00000577210 VPS72Q15906 364 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 C3orf36Q3SXR2 165 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 ATXN7L2Q5T6C5 722 aaPredicted RBP3.19□□□□□ -1.9
COPS3-213ENST00000577210 AFMIDQ63HM1 303 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 DARS2Q6PI48 645 aaKnown RBP3.19□□□□□ -1.9
COPS3-213ENST00000577210 MAMDC4Q6UXC1 1216 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 CHST15Q7LFX5 561 aaPredicted RBP3.19□□□□□ -1.9
COPS3-213ENST00000577210 GPRIN1Q7Z2K8 1008 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 HEATR3Q7Z4Q2 680 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 GGNQ86UU5 652 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 RAVER1Q8IY67 606 aaKnown RBP3.19□□□□□ -1.9
COPS3-213ENST00000577210 FITM2Q8N6M3 262 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 IL17RDQ8NFM7 739 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 KLHDC4Q8TBB5 520 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 IFI44Q8TCB0 444 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 TMEM176AQ96HP8 235 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 GNRHR2Q96P88 292 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 MOGAT1Q96PD6 335 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 RBM15Q96T37 977 aaKnown RBP eCLIP3.19□□□□□ -1.9
COPS3-213ENST00000577210 BDH2Q9BUT1 245 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 PNPOQ9NVS9 261 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 PIH1D1Q9NWS0 290 aaKnown RBP3.19□□□□□ -1.9
COPS3-213ENST00000577210 SERPINB13Q9UIV8 391 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 SIK3Q9Y2K2 1263 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 NEU2Q9Y3R4 380 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 TESMINQ9Y4I5 508 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 PCDHB1Q9Y5F3 818 aa3.19□□□□□ -1.9
COPS3-213ENST00000577210 ARID4BQ4LE39 1312 aaPredicted RBP3.19□□□□□ -1.9
COPS3-213ENST00000577210 ATRNL1Q5VV63 1379 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 A0A088AWK7 358 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 KRTAP23-1A1A580 65 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 GAGE12BA1L429 117 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 GAGE12HA6NDE8 117 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 CXorf49A8MYA2 514 aaPredicted RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 H3BUI4 141 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 GOLIM4O00461 696 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 MUSKO15146 869 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 GPR42O15529 346 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 PHGDHO43175 533 aaKnown RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 FOXS1O43638 330 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 B3GALT2O43825 422 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 UBXN7O94888 489 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 PEX11BO96011 259 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 THP07101 528 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 NBPF7P0C2Y1 421 aaPredicted RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 TYRP14679 529 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 ACO1P21399 889 aaKnown RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 HTR1BP28222 390 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 HIBADHP31937 336 aaKnown RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 PIK3CGP48736 1102 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 AGFG1P52594 562 aaKnown RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 TBX4P57082 545 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 DSC2Q02487 901 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 PIGFQ07326 219 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 FOXL1Q12952 345 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 TARDBPQ13148 414 aaKnown RBP eCLIP3.18□□□□□ -1.9
COPS3-213ENST00000577210 HABP2Q14520 560 aaPredicted RBP3.18□□□□□ -1.9
COPS3-213ENST00000577210 UBXN2BQ14CS0 331 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 LRRC41Q15345 812 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 SPATS1Q496A3 300 aa3.18□□□□□ -1.9
COPS3-213ENST00000577210 KHDC1Q4VXA5 237 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms