RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 NRP1O14786 923 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 CLTAP09496 248 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 ACOT2P49753 483 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 PLCB3Q01970 1234 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 SPAG1Q07617 926 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 TUSC3Q13454 348 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 SLC10A6Q3KNW5 377 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 SLFN12LQ6IEE8 588 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 KANK3Q6NY19 840 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 ALKAL1Q6UXT8 129 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 ZSWIM2Q8NEG5 633 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 ZNF507Q8TCN5 953 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 SAAL1Q96ER3 474 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 VN1R3Q9BXE9 311 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 LMAN2LQ9H0V9 348 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 GOLGA2P5Q9HBQ8 144 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 TLR9Q9NR96 1032 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 DMDP11532 3685 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 DCHS1Q96JQ0 3298 aa17.22■□□□□ 0.35
CHD3-215ENST00000572750 SMIM28A0A1B0GU29 152 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 UBE3AQ05086 875 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 PPP2R3AQ06190 1150 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 SOX4Q06945 474 aaPredicted RBP17.21■□□□□ 0.35
CHD3-215ENST00000572750 BMT2Q1RMZ1 405 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 TIGD5Q53EQ6 642 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 XKR4Q5GH76 650 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 ARMCX5Q6P1M9 558 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 TMEM130Q8N3G9 435 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 HASPINQ8TF76 798 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 NOC3LQ8WTT2 800 aaKnown RBP17.21■□□□□ 0.35
CHD3-215ENST00000572750 C18orf25Q96B23 403 aaPredicted RBP17.21■□□□□ 0.35
CHD3-215ENST00000572750 TIGD1Q96MW7 591 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 PCIF1Q9H4Z3 704 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 ENTPD7Q9NQZ7 604 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 LMCD1Q9NZU5 365 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 TUBGCP4Q9UGJ1 667 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 CPSF3Q9UKF6 684 aaKnown RBP17.21■□□□□ 0.35
CHD3-215ENST00000572750 FAN1Q9Y2M0 1017 aa17.21■□□□□ 0.35
CHD3-215ENST00000572750 TTC26A0AVF1 554 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 TGFB1I1O43294 461 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 RHOBTB3O94955 611 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 KIF4AO95239 1232 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 KCNE1P15382 129 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 ERVFC1P60507 584 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 KRT17Q04695 432 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 PSMD2Q13200 908 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 HSP90AA2PQ14568 343 aaPredicted RBP17.2■□□□□ 0.34
CHD3-215ENST00000572750 KYAT1Q16773 422 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 PLPP4Q5VZY2 271 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 CLEC17AQ6ZS10 378 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 CCDC47Q96A33 483 aaKnown RBP17.2■□□□□ 0.34
CHD3-215ENST00000572750 FAM212AQ96EL1 285 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 TCF25Q9BQ70 676 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 FAM213AQ9BRX8 229 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 RPF1Q9H9Y2 349 aaKnown RBP17.2■□□□□ 0.34
CHD3-215ENST00000572750 AGPAT3Q9NRZ7 376 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 LZTS1Q9Y250 596 aa17.2■□□□□ 0.34
CHD3-215ENST00000572750 CARNS1A5YM72 827 aa17.19■□□□□ 0.34
CHD3-215ENST00000572750 GOLGA8IPA6NC78 632 aa17.19■□□□□ 0.34
CHD3-215ENST00000572750 GOLGA8JA6NMD2 632 aa17.19■□□□□ 0.34
CHD3-215ENST00000572750 LACTBL1A8MY62 500 aa17.19■□□□□ 0.34
CHD3-215ENST00000572750 ALDH2P05091 517 aa17.19■□□□□ 0.34
CHD3-215ENST00000572750 GARTP22102 1010 aa17.19■□□□□ 0.34
CHD3-215ENST00000572750 KCNB1Q14721 858 aa17.19■□□□□ 0.34
CHD3-215ENST00000572750 TCEAL5Q5H9L2 206 aa17.19■□□□□ 0.34
CHD3-215ENST00000572750 CRELD2Q6UXH1 353 aaPredicted RBP17.19■□□□□ 0.34
CHD3-215ENST00000572750 ADGRD2Q7Z7M1 963 aa17.19■□□□□ 0.34
CHD3-215ENST00000572750 SMYD4Q8IYR2 804 aaPredicted RBP17.19■□□□□ 0.34
CHD3-215ENST00000572750 GBP4Q96PP9 640 aa17.19■□□□□ 0.34
CHD3-215ENST00000572750 NSUN3Q9H649 340 aaKnown RBP17.19■□□□□ 0.34
CHD3-215ENST00000572750 PUF60Q9UHX1 559 aaKnown RBP17.19■□□□□ 0.34
CHD3-215ENST00000572750 VWA8A3KMH1 1905 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 FSCN2O14926 492 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 NFICP08651 508 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 CA8P35219 290 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 CLCNKBP51801 687 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 KNOP1Q1ED39 458 aaKnown RBP17.18■□□□□ 0.34
CHD3-215ENST00000572750 HS2ST1Q7LGA3 356 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 DDX53Q86TM3 631 aaKnown RBP17.18■□□□□ 0.34
CHD3-215ENST00000572750 VPS52Q8N1B4 723 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 MICAL1Q8TDZ2 1067 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 AUTS2Q8WXX7 1259 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 KIF12Q96FN5 646 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 ZBP1Q9H171 429 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 PLEKHA5Q9HAU0 1116 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 SLC38A7Q9NVC3 462 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 HSPBP1Q9NZL4 362 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 HOOK1Q9UJC3 728 aaKnown RBP17.18■□□□□ 0.34
CHD3-215ENST00000572750 MAPK8IP1Q9UQF2 711 aa17.18■□□□□ 0.34
CHD3-215ENST00000572750 ZDBF2Q9HCK1 2354 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 ZFHX2Q9C0A1 2572 aaPredicted RBP17.17■□□□□ 0.34
CHD3-215ENST00000572750 TULP1O00294 542 aaPredicted RBP17.17■□□□□ 0.34
CHD3-215ENST00000572750 CLIC2O15247 247 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 EXTL3O43909 919 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 SMC2O95347 1197 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 IGFBP6P24592 240 aaPredicted RBP17.17■□□□□ 0.34
CHD3-215ENST00000572750 CYP2J2P51589 502 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 GUCY2FP51841 1108 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 WNT7BP56706 349 aa17.17■□□□□ 0.34
CHD3-215ENST00000572750 JADE1Q6IE81 842 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms