RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 TCF25Q9BQ70 676 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 ZBP1Q9H171 429 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 RPF1Q9H9Y2 349 aaKnown RBP9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 TOPORSQ9NS56 1045 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 PCDHA5Q9Y5H7 936 aa9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 COL4A4P53420 1690 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC1-203ENST00000571739 ATG2AQ2TAZ0 1938 aa9.46□□□□□ -0.89
TRAPPC1-203ENST00000571739 CARNS1A5YM72 827 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 C2orf71A6NGG8 1288 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 CLIC2O15247 247 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 LINC01565O15544 149 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 TADA2AO75478 443 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 KIF4AO95239 1232 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 SOD2P04179 222 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 CTSAP10619 480 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 UBE2HP62256 183 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 POU5F1Q01860 360 aaKnown RBP9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 DLX2Q07687 328 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 ADAM15Q13444 863 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 KCNC3Q14003 757 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 HSP90AA2PQ14568 343 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 KCNB1Q14721 858 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 KNOP1Q1ED39 458 aaKnown RBP9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 CTC1Q2NKJ3 1217 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 KIAA0319Q5VV43 1072 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 PLPP4Q5VZY2 271 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 JADE1Q6IE81 842 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 PDE12Q6L8Q7 609 aaKnown RBP9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 DCLRE1AQ6PJP8 1040 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 STXBP4Q6ZWJ1 553 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 C3orf58Q8NDZ4 430 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 HASPINQ8TF76 798 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 FAM212AQ96EL1 285 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 B3GALT6Q96L58 329 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 FAM213AQ9BRX8 229 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 KCTD10Q9H3F6 313 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 IGFLR1Q9H665 355 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 NGRNQ9NPE2 291 aaKnown RBP9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 AGPAT3Q9NRZ7 376 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 CHST7Q9NS84 486 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 LMBRD1Q9NUN5 540 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 EXOC1Q9NV70 894 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 ADAM28Q9UKQ2 775 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 MAPK8IP1Q9UQF2 711 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 IRAK3Q9Y616 596 aa9.46□□□□□ -0.9
TRAPPC1-203ENST00000571739 CITO14578 2027 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 TMEM189-UBE2V1I3L0A0 370 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 EXTL3O43909 919 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 B3GAT3O94766 335 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 LDHAP00338 332 aaKnown RBP9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 NFICP08651 508 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 LRPAP1P30533 357 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 BRCC3P46736 316 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 NRIP1P48552 1158 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 GUCY2FP51841 1108 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 SNRPFP62306 86 aaKnown RBP9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 RBM10P98175 930 aaKnown RBP9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 DUSP6Q16828 381 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 TIGD5Q53EQ6 642 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 SPATA1Q5VX52 437 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 ARMCX5Q6P1M9 558 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 FUT10Q6P4F1 479 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 CBWD2Q8IUF1 395 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 CD302Q8IX05 232 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 GPD1LQ8N335 351 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 RDH13Q8NBN7 331 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 VN1R2Q8NFZ6 395 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 KIF12Q96FN5 646 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 DDX27Q96GQ7 796 aaKnown RBP9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 FBXL18Q96ME1 805 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 ASB7Q9H672 318 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 TLE6Q9H808 572 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 SLC38A7Q9NVC3 462 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 DMAC2Q9NW81 257 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 HSPBP1Q9NZL4 362 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 TUBGCP4Q9UGJ1 667 aa9.45□□□□□ -0.9
TRAPPC1-203ENST00000571739 PODXLO00592 558 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 PDXKO00764 312 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 PPEF2O14830 753 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 CLASP2O75122 1294 aaKnown RBP9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 GLP2RO95838 553 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 CYP3A5P20815 502 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 BMP6P22004 513 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 RPL9P32969 192 aaKnown RBP9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 DSG1Q02413 1049 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 TFF2Q03403 129 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 PPP2R3AQ06190 1150 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 SMC1AQ14683 1233 aaKnown RBP9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 SKIV2LQ15477 1246 aaKnown RBP9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 PTPN14Q15678 1187 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 FAM171A1Q5VUB5 890 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 ISM2Q6H9L7 571 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 BRSK2Q8IWQ3 736 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 C12orf56Q8IXR9 622 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 EFCAB13Q8IY85 973 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 SMYD4Q8IYR2 804 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 EFHBQ8N7U6 833 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 LNX1Q8TBB1 728 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 TMEM174Q8WUU8 243 aa9.44□□□□□ -0.9
TRAPPC1-203ENST00000571739 HLA-CQ95604 372 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms