RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 RPS6KC1Q96S38 1066 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 MPHOSPH6Q99547 160 aaKnown RBP5.88□□□□□ -1.47
LINC00560-201ENST00000564593 PTPN18Q99952 460 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 SEC61A2Q9H9S3 476 aa5.88□□□□□ -1.47
LINC00560-201ENST00000564593 FEZ2Q9UHY8 353 aaPredicted RBP5.88□□□□□ -1.47
LINC00560-201ENST00000564593 ARID4BQ4LE39 1312 aaPredicted RBP5.87□□□□□ -1.47
LINC00560-201ENST00000564593 HOXA3O43365 443 aaPredicted RBP5.87□□□□□ -1.47
LINC00560-201ENST00000564593 PQBP1O60828 265 aaKnown RBP5.87□□□□□ -1.47
LINC00560-201ENST00000564593 IFIT2P09913 472 aaKnown RBP5.87□□□□□ -1.47
LINC00560-201ENST00000564593 FTH1P19P0C7X4 201 aa5.87□□□□□ -1.47
LINC00560-201ENST00000564593 PEX2P28328 305 aa5.87□□□□□ -1.47
LINC00560-201ENST00000564593 OS9Q13438 667 aaPredicted RBP5.87□□□□□ -1.47
LINC00560-201ENST00000564593 SURF1Q15526 300 aa5.87□□□□□ -1.47
LINC00560-201ENST00000564593 DBX2Q6ZNG2 339 aa5.87□□□□□ -1.47
LINC00560-201ENST00000564593 C11orf96Q7Z7L8 435 aa5.87□□□□□ -1.47
LINC00560-201ENST00000564593 LRTOMTQ8WZ04 291 aa5.87□□□□□ -1.47
LINC00560-201ENST00000564593 C11orf54Q9H0W9 315 aaPredicted RBP5.87□□□□□ -1.47
LINC00560-201ENST00000564593 WDCPQ9H6R7 721 aa5.87□□□□□ -1.47
LINC00560-201ENST00000564593 PCDHA1Q9Y5I3 950 aa5.87□□□□□ -1.47
LINC00560-201ENST00000564593 MGEA5O60502 916 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 TRIM13O60858 407 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 STC2O76061 302 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 FAM214AQ32MH5 1076 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 FAM111BQ6SJ93 734 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 TAX1BP1Q86VP1 789 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 PLXDC1Q8IUK5 500 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 SAMD3Q8N6K7 520 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 DCBLD1Q8N8Z6 715 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 MRI1Q9BV20 369 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 APOL5Q9BWW9 433 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 KCNH6Q9H252 994 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 NELFAQ9H3P2 528 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 ZMAT3Q9HA38 289 aaKnown RBP5.86□□□□□ -1.47
LINC00560-201ENST00000564593 MSL2Q9HCI7 577 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 TPCN1Q9ULQ1 816 aa5.86□□□□□ -1.47
LINC00560-201ENST00000564593 A0A1W2PPL8 197 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 NT5C1B-RDH14C9J2C7 533 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 F2RL2O00254 374 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 PHGDHO43175 533 aaKnown RBP5.85□□□□□ -1.47
LINC00560-201ENST00000564593 CD1AP06126 327 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 MYL3P08590 195 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 ATP5JP18859 108 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 EPHB4P54760 987 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 OTUD7BQ6GQQ9 843 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 APOA5Q6Q788 366 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 SLC35B2Q8TB61 432 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 PARD3BQ8TEW8 1205 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 SLC39A13Q96H72 371 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 TMEM176AQ96HP8 235 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 MYOCQ99972 504 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 NAA15Q9BXJ9 866 aaKnown RBP5.85□□□□□ -1.47
LINC00560-201ENST00000564593 C22orf23Q9BZE7 217 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 ATP6V0A4Q9HBG4 840 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 SARS2Q9NP81 518 aaKnown RBP5.85□□□□□ -1.47
LINC00560-201ENST00000564593 SLC23A1Q9UHI7 598 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 CPA4Q9UI42 421 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 DUSP10Q9Y6W6 482 aa5.85□□□□□ -1.47
LINC00560-201ENST00000564593 CXorf49A8MYA2 514 aaPredicted RBP5.84□□□□□ -1.47
LINC00560-201ENST00000564593 GRM6O15303 877 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 LAMTOR5O43504 91 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 SNRPA1P09661 255 aaKnown RBP5.84□□□□□ -1.47
LINC00560-201ENST00000564593 SLC5A1P13866 664 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 BMP7P18075 431 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 PRDX5P30044 214 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 RPS19P39019 145 aaKnown RBP5.84□□□□□ -1.47
LINC00560-201ENST00000564593 POLD3Q15054 466 aaPredicted RBP5.84□□□□□ -1.47
LINC00560-201ENST00000564593 PABPC1LQ4VXU2 614 aaKnown RBP5.84□□□□□ -1.47
LINC00560-201ENST00000564593 KHDC1LQ5JSQ8 128 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 SLFN13Q68D06 897 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 PPP1R3BQ86XI6 285 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 BRIX1Q8TDN6 353 aaKnown RBP5.84□□□□□ -1.47
LINC00560-201ENST00000564593 BORCS6Q96GS4 357 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 ZNF512Q96ME7 567 aaPredicted RBP5.84□□□□□ -1.47
LINC00560-201ENST00000564593 PSMD1Q99460 953 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 PLA2G12BQ9BX93 195 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 NUP62CLQ9H1M0 184 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 MRPL46Q9H2W6 279 aaKnown RBP5.84□□□□□ -1.47
LINC00560-201ENST00000564593 PARD6AQ9NPB6 346 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 CNNM1Q9NRU3 951 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 GNL3LQ9NVN8 582 aaKnown RBP5.84□□□□□ -1.47
LINC00560-201ENST00000564593 PCDHA6Q9UN73 950 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 HDAC5Q9UQL6 1122 aa5.84□□□□□ -1.47
LINC00560-201ENST00000564593 TCRBV7S2A1N4TA0A589 114 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 B5MCH6 92 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 KIAA0391O15091 583 aaKnown RBP5.84□□□□□ -1.48
LINC00560-201ENST00000564593 PJA2O43164 708 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 KITP10721 976 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 MTHFD1P11586 935 aaKnown RBP5.84□□□□□ -1.48
LINC00560-201ENST00000564593 MYF5P13349 255 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 GRM7Q14831 915 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 DACT2Q5SW24 774 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 FKBP15Q5T1M5 1219 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 ANKS6Q68DC2 871 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 ZNF529Q6P280 563 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 SEM1Q6ZVN7 128 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 XYLT1Q86Y38 959 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 FAM90A1Q86YD7 464 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 GIMAP8Q8ND71 665 aaPredicted RBP5.84□□□□□ -1.48
LINC00560-201ENST00000564593 FEZF2Q8TBJ5 459 aa5.84□□□□□ -1.48
LINC00560-201ENST00000564593 TNPO1Q92973 898 aaKnown RBP5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms