RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 FBXL18Q96ME1 805 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 FAM213AQ9BRX8 229 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 KCTD10Q9H3F6 313 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 PCIF1Q9H4Z3 704 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 KIAA1586Q9HCI6 787 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 TLR9Q9NR96 1032 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 HSPBP1Q9NZL4 362 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 DERAQ9Y315 318 aa13.08□□□□□ -0.32
CDK12-203ENST00000558240 ZNF233A6NK53 670 aa13.07□□□□□ -0.32
CDK12-203ENST00000558240 CLIC2O15247 247 aa13.07□□□□□ -0.32
CDK12-203ENST00000558240 XPOTO43592 962 aaKnown RBP13.07□□□□□ -0.32
CDK12-203ENST00000558240 IL18RAPO95256 599 aa13.07□□□□□ -0.32
CDK12-203ENST00000558240 CYP3A5P20815 502 aa13.07□□□□□ -0.32
CDK12-203ENST00000558240 RPL9P32969 192 aaKnown RBP13.07□□□□□ -0.32
CDK12-203ENST00000558240 MYBPC2Q14324 1141 aa13.07□□□□□ -0.32
CDK12-203ENST00000558240 UPP1Q16831 310 aa13.07□□□□□ -0.32
CDK12-203ENST00000558240 TMEM173Q86WV6 379 aaPredicted RBP13.07□□□□□ -0.32
CDK12-203ENST00000558240 SLC9A9Q8IVB4 645 aa13.07□□□□□ -0.32
CDK12-203ENST00000558240 BRSK2Q8IWQ3 736 aa13.07□□□□□ -0.32
CDK12-203ENST00000558240 ZSWIM2Q8NEG5 633 aa13.07□□□□□ -0.32
CDK12-203ENST00000558240 ERCC4Q92889 916 aaPredicted RBP13.07□□□□□ -0.32
CDK12-203ENST00000558240 SAAL1Q96ER3 474 aa13.07□□□□□ -0.32
CDK12-203ENST00000558240 DDX27Q96GQ7 796 aaKnown RBP13.07□□□□□ -0.32
CDK12-203ENST00000558240 MARCH5Q9NX47 278 aa13.07□□□□□ -0.32
CDK12-203ENST00000558240 UBQLN1Q9UMX0 589 aaKnown RBP13.07□□□□□ -0.32
CDK12-203ENST00000558240 PRG3Q9Y2Y8 225 aaPredicted RBP13.07□□□□□ -0.32
CDK12-203ENST00000558240 C2CD2Q9Y426 696 aa13.07□□□□□ -0.32
CDK12-203ENST00000558240 SCN1AP35498 2009 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 SPTBN5Q9NRC6 3674 aaKnown RBP13.06□□□□□ -0.32
CDK12-203ENST00000558240 VWA8A3KMH1 1905 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 GOLGA8IPA6NC78 632 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 CASTOR2A6NHX0 329 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 GOLGA8JA6NMD2 632 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 TMEM189-UBE2V1I3L0A0 370 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 FSCN2O14926 492 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 CALUO43852 315 aaPredicted RBP13.06□□□□□ -0.32
CDK12-203ENST00000558240 TADA2AO75478 443 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 EFEMP2O95967 443 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 SOX4Q06945 474 aaPredicted RBP13.06□□□□□ -0.32
CDK12-203ENST00000558240 BMS1Q14692 1282 aaKnown RBP13.06□□□□□ -0.32
CDK12-203ENST00000558240 NFIL3Q16649 462 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 TIGD5Q53EQ6 642 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 DCLRE1AQ6PJP8 1040 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 NT5DC4Q86YG4 428 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 XXYLT1Q8NBI6 393 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 BCL7CQ8WUZ0 217 aaPredicted RBP13.06□□□□□ -0.32
CDK12-203ENST00000558240 C18orf25Q96B23 403 aaPredicted RBP13.06□□□□□ -0.32
CDK12-203ENST00000558240 FAM212AQ96EL1 285 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 KIF12Q96FN5 646 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 PAAF1Q9BRP4 392 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 NSUN3Q9H649 340 aaKnown RBP13.06□□□□□ -0.32
CDK12-203ENST00000558240 NGRNQ9NPE2 291 aaKnown RBP13.06□□□□□ -0.32
CDK12-203ENST00000558240 DMAC2Q9NW81 257 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 RBAKQ9NYW8 714 aaPredicted RBP13.06□□□□□ -0.32
CDK12-203ENST00000558240 KIAA1468Q9P260 1216 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 MAN1B1Q9UKM7 699 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 ADAM28Q9UKQ2 775 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 MAPK8IP1Q9UQF2 711 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 TRAF3IP3Q9Y228 551 aa13.06□□□□□ -0.32
CDK12-203ENST00000558240 CTSAP10619 480 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 LRPAP1P30533 357 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 PPP1R2P41236 205 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 PRCPP42785 496 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 CYP2J2P51589 502 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 CLCNKBP51801 687 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 ERVFC1P60507 584 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 SPAG1Q07617 926 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 TMEM132DQ14C87 1099 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 SURF1Q15526 300 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 SNRNP35Q16560 246 aaKnown RBP13.05□□□□□ -0.32
CDK12-203ENST00000558240 CAMK4Q16566 473 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 SPATA1Q5VX52 437 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 JADE1Q6IE81 842 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 TMC7Q7Z402 723 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 SMYD4Q8IYR2 804 aaPredicted RBP13.05□□□□□ -0.32
CDK12-203ENST00000558240 RNF168Q8IYW5 571 aaPredicted RBP13.05□□□□□ -0.32
CDK12-203ENST00000558240 VPS52Q8N1B4 723 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 TRIML1Q8N9V2 468 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 BEST2Q8NFU1 509 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 MAFAQ8NHW3 353 aaPredicted RBP13.05□□□□□ -0.32
CDK12-203ENST00000558240 MICAL1Q8TDZ2 1067 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 PPP2R3CQ969Q6 453 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 TCF25Q9BQ70 676 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 VN1R3Q9BXE9 311 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 CLSTN2Q9H4D0 955 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 GOLGA2P5Q9HBQ8 144 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 CACNG4Q9UBN1 327 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 IRAK3Q9Y616 596 aa13.05□□□□□ -0.32
CDK12-203ENST00000558240 MTCL1Q9Y4B5 1905 aaKnown RBP13.04□□□□□ -0.32
CDK12-203ENST00000558240 XIRP2A4UGR9 3374 aa13.04□□□□□ -0.32
CDK12-203ENST00000558240 F8W810 466 aa13.04□□□□□ -0.32
CDK12-203ENST00000558240 PODXLO00592 558 aa13.04□□□□□ -0.32
CDK12-203ENST00000558240 EXOC3O60645 756 aa13.04□□□□□ -0.32
CDK12-203ENST00000558240 B3GAT3O94766 335 aa13.04□□□□□ -0.32
CDK12-203ENST00000558240 KIF4AO95239 1232 aa13.04□□□□□ -0.32
CDK12-203ENST00000558240 NR3C1P04150 777 aa13.04□□□□□ -0.32
CDK12-203ENST00000558240 SOD2P04179 222 aa13.04□□□□□ -0.32
CDK12-203ENST00000558240 NFICP08651 508 aa13.04□□□□□ -0.32
CDK12-203ENST00000558240 RPL13P26373 211 aaKnown RBP13.04□□□□□ -0.32
CDK12-203ENST00000558240 IRS1P35568 1242 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms