RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 CCDC85BQ15834 202 aaPredicted RBP15.58■□□□□ 0.08
USP3-205ENST00000557884 ZNF658Q5TYW1 1059 aaPredicted RBP15.58■□□□□ 0.08
USP3-205ENST00000557884 JADE1Q6IE81 842 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 CBWD2Q8IUF1 395 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 BRSK2Q8IWQ3 736 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 GUF1Q8N442 669 aaKnown RBP15.58■□□□□ 0.08
USP3-205ENST00000557884 RDH13Q8NBN7 331 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 GOLGA5Q8TBA6 731 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 PPM1EQ8WY54 764 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 MRPL38Q96DV4 380 aaKnown RBP15.58■□□□□ 0.08
USP3-205ENST00000557884 COLEC11Q9BWP8 271 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 VN1R3Q9BXE9 311 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 LMAN2LQ9H0V9 348 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 SLC38A7Q9NVC3 462 aa15.58■□□□□ 0.08
USP3-205ENST00000557884 RBAKQ9NYW8 714 aaPredicted RBP15.58■□□□□ 0.08
USP3-205ENST00000557884 PUF60Q9UHX1 559 aaKnown RBP15.58■□□□□ 0.08
USP3-205ENST00000557884 KIF4AO95239 1232 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 PRCPP42785 496 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 CLCNKBP51801 687 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 ERVFC1P60507 584 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 SNRPFP62306 86 aaKnown RBP15.57■□□□□ 0.08
USP3-205ENST00000557884 UBE3AQ05086 875 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 TMEM132DQ14C87 1099 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 PLPP4Q5VZY2 271 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 MICAL1Q8TDZ2 1067 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 FAM84AQ96KN4 292 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 NUP62CLQ9H1M0 184 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 ENTPD7Q9NQZ7 604 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 TLR9Q9NR96 1032 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 CGNQ9P2M7 1197 aaKnown RBP15.57■□□□□ 0.08
USP3-205ENST00000557884 STXBP5LQ9Y2K9 1186 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 COL4A4P53420 1690 aaPredicted RBP15.57■□□□□ 0.08
USP3-205ENST00000557884 COL6A3P12111 3177 aa15.57■□□□□ 0.08
USP3-205ENST00000557884 CARNS1A5YM72 827 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 ZNF233A6NK53 670 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 PODXLO00592 558 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 PDXKO00764 312 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 KIAA0391O15091 583 aaKnown RBP15.56■□□□□ 0.08
USP3-205ENST00000557884 CALUO43852 315 aaPredicted RBP15.56■□□□□ 0.08
USP3-205ENST00000557884 EXOC3O60645 756 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 TADA2AO75478 443 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 IL18RAPO95256 599 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 NR3C1P04150 777 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 ADRB2P07550 413 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 BMP6P22004 513 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 MCM4P33991 863 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 CA8P35219 290 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 MORC3Q14149 939 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 SNRNP35Q16560 246 aaKnown RBP15.56■□□□□ 0.08
USP3-205ENST00000557884 TAS1R1Q7RTX1 841 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 TMC7Q7Z402 723 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 CD302Q8IX05 232 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 C12orf56Q8IXR9 622 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 EFCAB13Q8IY85 973 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 VPS52Q8N1B4 723 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 XXYLT1Q8NBI6 393 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 AUTS2Q8WXX7 1259 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 TCF25Q9BQ70 676 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 LMCD1Q9NZU5 365 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 KIAA1468Q9P260 1216 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 ADAM28Q9UKQ2 775 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 UBQLN1Q9UMX0 589 aaKnown RBP15.56■□□□□ 0.08
USP3-205ENST00000557884 LZTS1Q9Y250 596 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 KIAA1671Q9BY89 1806 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 REV3LO60673 3130 aa15.56■□□□□ 0.08
USP3-205ENST00000557884 B3GAT3O94766 335 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 CD44P16070 742 aaKnown RBP15.55■□□□□ 0.08
USP3-205ENST00000557884 POU3F3P20264 500 aaPredicted RBP15.55■□□□□ 0.08
USP3-205ENST00000557884 TFAMQ00059 246 aaKnown RBP15.55■□□□□ 0.08
USP3-205ENST00000557884 ZBTB6Q15916 424 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 UPP1Q16831 310 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 TIGD5Q53EQ6 642 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 LMBRD2Q68DH5 695 aaPredicted RBP15.55■□□□□ 0.08
USP3-205ENST00000557884 FUT10Q6P4F1 479 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 DDX53Q86TM3 631 aaKnown RBP15.55■□□□□ 0.08
USP3-205ENST00000557884 ADSSL1Q8N142 457 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 C3orf58Q8NDZ4 430 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 BEST2Q8NFU1 509 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 MAFAQ8NHW3 353 aaPredicted RBP15.55■□□□□ 0.08
USP3-205ENST00000557884 B3GALT6Q96L58 329 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 FBXL18Q96ME1 805 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 UROC1Q96N76 676 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 GPR62Q9BZJ7 368 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 ZBP1Q9H171 429 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 ASB7Q9H672 318 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 KIAA1586Q9HCI6 787 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 PDE11AQ9HCR9 933 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 DMAC2Q9NW81 257 aa15.55■□□□□ 0.08
USP3-205ENST00000557884 PRUNE2Q8WUY3 3088 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 I3L4J1 428 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 FSCN2O14926 492 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 XPOTO43592 962 aaKnown RBP15.54■□□□□ 0.08
USP3-205ENST00000557884 RPL9P32969 192 aaKnown RBP15.54■□□□□ 0.08
USP3-205ENST00000557884 CASP4P49662 377 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 POU5F1Q01860 360 aaKnown RBP15.54■□□□□ 0.08
USP3-205ENST00000557884 CYP24A1Q07973 514 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 STIM1Q13586 685 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 TCEAL5Q5H9L2 206 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 SPATA1Q5VX52 437 aa15.54■□□□□ 0.08
USP3-205ENST00000557884 CEP135Q66GS9 1140 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms