RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 TRIM54Q9BYV2 358 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 TMEM8AQ9HCN3 771 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 TMEM74BQ9NUR3 256 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 GNL3LQ9NVN8 582 aaKnown RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ING3Q9NXR8 418 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 BCCIPQ9P287 314 aaKnown RBP eCLIP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 USP25Q9UHP3 1055 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 TESMINQ9Y4I5 508 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 CXorf49A8MYA2 514 aaPredicted RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ALDH2P05091 517 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ALAS1P13196 640 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 CR2P20023 1033 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 DDCP20711 480 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 GCSHP23434 173 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 RAB1AP62820 205 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 RIN1Q13671 783 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 CNN3Q15417 329 aaKnown RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ATP2B3Q16720 1220 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ZNF648Q5T619 568 aaPredicted RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 SLC4A10Q6U841 1118 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 STK32CQ86UX6 486 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 LRRC56Q8IYG6 542 aaPredicted RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 PLBD2Q8NHP8 589 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 LRTOMTQ8WZ04 291 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 CDC5LQ99459 802 aaKnown RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 TCF25Q9BQ70 676 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 C1QTNF3Q9BXJ4 246 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 NAA15Q9BXJ9 866 aaKnown RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 KIAA1683Q9H0B3 1180 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 C11orf54Q9H0W9 315 aaPredicted RBP2.18□□□□□ -2.06
HIF1A-212ENST00000557538 PPP4R1LQ9P1A2 415 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 INTUQ9ULD6 942 aa2.18□□□□□ -2.06
HIF1A-212ENST00000557538 ADAMTS20P59510 1910 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 SPATA31A3Q5VYP0 1347 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 PLEKHD1A6NEE1 506 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 CLCA1A8K7I4 914 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 CYP27B1O15528 508 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 LAMTOR5O43504 91 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 NUAK1O60285 661 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 GPR32O75388 356 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 TYRP1P17643 537 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 RAC3P60763 192 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 HTRA4P83105 476 aaPredicted RBP2.17□□□□□ -2.06
HIF1A-212ENST00000557538 SAFB2Q14151 953 aaKnown RBP eCLIP2.17□□□□□ -2.06
HIF1A-212ENST00000557538 PLS1Q14651 629 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 CLUL1Q15846 466 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 KHDC1Q4VXA5 237 aaKnown RBP2.17□□□□□ -2.06
HIF1A-212ENST00000557538 ARHGAP29Q52LW3 1261 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 PHF19Q5T6S3 580 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 SMC5Q8IY18 1101 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 SHCBP1Q8NEM2 672 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 NUP133Q8WUM0 1156 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 MTFMTQ96DP5 389 aaKnown RBP2.17□□□□□ -2.06
HIF1A-212ENST00000557538 MED15Q96RN5 788 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 B3GNT5Q9BYG0 378 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 BHMT2Q9H2M3 363 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 SMURF2Q9HAU4 748 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 XPNPEP3Q9NQH7 507 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 TLR9Q9NR96 1032 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 SLC23A1Q9UHI7 598 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 MYBBP1AQ9BQG0 1328 aaKnown RBP2.17□□□□□ -2.06
HIF1A-212ENST00000557538 MBD3L4A6NDZ8 208 aaPredicted RBP2.17□□□□□ -2.06
HIF1A-212ENST00000557538 MBD3L3A6NE82 208 aaPredicted RBP2.17□□□□□ -2.06
HIF1A-212ENST00000557538 WNT10BO00744 389 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 KCNQ3O43525 872 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 MAP4K4O95819 1239 aaPredicted RBP2.17□□□□□ -2.06
HIF1A-212ENST00000557538 PCSK1P29120 753 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 NPEPPSP55786 919 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 CLRN1P58418 232 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 ZNF568Q3ZCX4 644 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 HEATR3Q7Z4Q2 680 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 PPP1R32Q7Z5V6 425 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 DEPTORQ8TB45 409 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 CEP95Q96GE4 821 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 ZNF512Q96ME7 567 aaPredicted RBP2.17□□□□□ -2.06
HIF1A-212ENST00000557538 ELAC2Q9BQ52 826 aaKnown RBP2.17□□□□□ -2.06
HIF1A-212ENST00000557538 LSM14BQ9BX40 385 aaKnown RBP2.17□□□□□ -2.06
HIF1A-212ENST00000557538 LRRC27Q9C0I9 530 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 DMRT3Q9NQL9 472 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 STARD7Q9NQZ5 370 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 CDC42EP3Q9UKI2 254 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 ZDHHC9Q9Y397 364 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 PNPLA7Q6ZV29 1317 aa2.17□□□□□ -2.06
HIF1A-212ENST00000557538 TRIM43BA6NCK2 446 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 MARCH11A6NNE9 402 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 ZKSCAN1P17029 563 aaPredicted RBP2.16□□□□□ -2.06
HIF1A-212ENST00000557538 FDXRP22570 491 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 NT5DC1Q5TFE4 455 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 SWSAP1Q6NVH7 229 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 USP17L6PQ6QN14 398 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 TTLL10Q6ZVT0 673 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 ZNF365Q70YC5 407 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 KRT73Q86Y46 540 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 RHOT2Q8IXI1 618 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 GRAMD1CQ8IYS0 662 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 FAM156AQ8NDB6 213 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 PPP1R35Q8TAP8 253 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 CYP2W1Q8TAV3 490 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 POC1BQ8TC44 478 aa2.16□□□□□ -2.06
HIF1A-212ENST00000557538 DPF2Q92785 391 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms