RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 TLE6Q9H808 572 aa14.07□□□□□ -0.16
MTHFD1-208ENST00000554739 SLC39A2Q9NP94 309 aa14.07□□□□□ -0.16
MTHFD1-208ENST00000554739 TSHZ2Q9NRE2 1034 aa14.07□□□□□ -0.16
MTHFD1-208ENST00000554739 SLC38A7Q9NVC3 462 aa14.07□□□□□ -0.16
MTHFD1-208ENST00000554739 ADAM28Q9UKQ2 775 aa14.07□□□□□ -0.16
MTHFD1-208ENST00000554739 IRAK3Q9Y616 596 aa14.07□□□□□ -0.16
MTHFD1-208ENST00000554739 NLRC5Q86WI3 1866 aa14.07□□□□□ -0.16
MTHFD1-208ENST00000554739 PER2O15055 1255 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 TGFB1I1O43294 461 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 KIF4AO95239 1232 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 SOD2P04179 222 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 RPN1P04843 607 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 LTBRP36941 435 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 CLCNKBP51801 687 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 POU5F1Q01860 360 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 TFF2Q03403 129 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 SPAG1Q07617 926 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 BMT2Q1RMZ1 405 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 KIAA0319Q5VV43 1072 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 CD300LGQ6UXG3 332 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 EFHBQ8N7U6 833 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 TMEM87AQ8NBN3 555 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 ZSWIM2Q8NEG5 633 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 AUTS2Q8WXX7 1259 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 DDX27Q96GQ7 796 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 UROC1Q96N76 676 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 TSPAN18Q96SJ8 248 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 CBWD1Q9BRT8 395 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 RPF1Q9H9Y2 349 aaKnown RBP14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 GOLGA2P5Q9HBQ8 144 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 CHST7Q9NS84 486 aa14.06□□□□□ -0.16
MTHFD1-208ENST00000554739 TMEM189-UBE2V1I3L0A0 370 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 LINC01565O15544 149 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 RPL9P32969 192 aaKnown RBP14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 PPP2R3AQ06190 1150 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 BMS1Q14692 1282 aaKnown RBP14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 PTPN14Q15678 1187 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 DUSP6Q16828 381 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 FUT10Q6P4F1 479 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 CD302Q8IX05 232 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 KIAA0895Q8NCT3 520 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 ATXN2LQ8WWM7 1075 aaKnown RBP14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 TIGD1Q96MW7 591 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 IPO9Q96P70 1041 aaKnown RBP14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 CDCA3Q99618 268 aaPredicted RBP14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 FAM213AQ9BRX8 229 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 UBE2ZQ9H832 354 aaPredicted RBP14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 EXOC1Q9NV70 894 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 THEGQ9P2T0 379 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 MYH11P35749 1972 aa14.05□□□□□ -0.16
MTHFD1-208ENST00000554739 B3GAT3O94766 335 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 RHOBTB3O94955 611 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 LDHAP00338 332 aaKnown RBP14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 CYP3A5P20815 502 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 SNRPFP62306 86 aaKnown RBP14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 DLX2Q07687 328 aaPredicted RBP14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 KCNC3Q14003 757 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 KNOP1Q1ED39 458 aaKnown RBP14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 USP41Q3LFD5 358 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 NELFCDQ8IXH7 590 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 C3orf58Q8NDZ4 430 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 VN1R2Q8NFZ6 395 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 HASPINQ8TF76 798 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 FAM212AQ96EL1 285 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 SAAL1Q96ER3 474 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 KIF12Q96FN5 646 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 CCDC34Q96HJ3 373 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 B3GALT6Q96L58 329 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 HERC2P3Q9BVR0 1158 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 PCIF1Q9H4Z3 704 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 ASB7Q9H672 318 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 MRPL17Q9NRX2 175 aaKnown RBP14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 AGPAT3Q9NRZ7 376 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 CLDND1Q9NY35 253 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 TUBGCP4Q9UGJ1 667 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 UBE4BO95155 1302 aa14.04□□□□□ -0.16
MTHFD1-208ENST00000554739 TCHHQ07283 1943 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 GOLGA8IPA6NC78 632 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 GOLGA8JA6NMD2 632 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 PODXLO00592 558 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 KIAA0391O15091 583 aaKnown RBP14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 EXTL3O43909 919 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 CLASP2O75122 1294 aaKnown RBP14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 GLP2RO95838 553 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 KCNA5P22460 613 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 GLUD2P49448 558 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 MRPS5P82675 430 aaKnown RBP14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 RBM10P98175 930 aaKnown RBP14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 DSG1Q02413 1049 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 PNOCQ13519 176 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 KCNB1Q14721 858 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 FAM171A1Q5VUB5 890 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 SPATA1Q5VX52 437 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 JADE1Q6IE81 842 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 ARMCX5Q6P1M9 558 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 TMEM184AQ6ZMB5 413 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 CLEC17AQ6ZS10 378 aa14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 ELOA2Q8IYF1 753 aaPredicted RBP14.03□□□□□ -0.16
MTHFD1-208ENST00000554739 GPR65Q8IYL9 337 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms