RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 FRMD3A2A2Y4 597 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 TEX28O15482 410 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 PPP1R37O75864 691 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 C1RP00736 705 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 EPCAMP16422 314 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 DNM1Q05193 864 aaKnown RBP14.25□□□□□ -0.13
SHMT2-211ENST00000554310 ALCAMQ13740 583 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 CBX2Q14781 532 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-211ENST00000554310 UPP1Q16831 310 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 CES5AQ6NT32 575 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 PDXDC1Q6P996 788 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 ELMSAN1Q6PJG2 1045 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 DCLRE1AQ6PJP8 1040 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 TAS1R1Q7RTX1 841 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 ZNF720Q7Z2F6 126 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 IQUBQ8NA54 791 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 HASPINQ8TF76 798 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 DDX27Q96GQ7 796 aaKnown RBP14.25□□□□□ -0.13
SHMT2-211ENST00000554310 FBXL18Q96ME1 805 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 NECTIN4Q96NY8 510 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 TTPALQ9BTX7 342 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 PHF7Q9BWX1 381 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-211ENST00000554310 PANK2Q9BZ23 570 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 SFXN1Q9H9B4 322 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 MRPL44Q9H9J2 332 aaKnown RBP14.25□□□□□ -0.13
SHMT2-211ENST00000554310 PLEKHA5Q9HAU0 1116 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 MAGEF1Q9HAY2 307 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 KBTBD4Q9NVX7 518 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 DPP7Q9UHL4 492 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 DENND4AQ7Z401 1863 aa14.25□□□□□ -0.13
SHMT2-211ENST00000554310 A0A0B4J269 797 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 OGTO15294 1046 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 MEFVO15553 781 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-211ENST00000554310 FAM189A1O60320 539 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 B3GAT3O94766 335 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 GLUD1P00367 558 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 CXCL8P10145 99 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 IDEP14735 1019 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 CLCNKBP51801 687 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 PPP2R3AQ06190 1150 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 SOX4Q06945 474 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-211ENST00000554310 SLC10A6Q3KNW5 377 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 ZC2HC1CQ53FD0 456 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-211ENST00000554310 RTP2Q5QGT7 225 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 FAM171A1Q5VUB5 890 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 SLC39A4Q6P5W5 647 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-211ENST00000554310 RIN2Q8WYP3 895 aaPredicted RBP14.24□□□□□ -0.13
SHMT2-211ENST00000554310 PIK3R5Q8WYR1 880 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 DHX58Q96C10 678 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 B3GALT6Q96L58 329 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 ZMAT2Q96NC0 199 aaKnown RBP14.24□□□□□ -0.13
SHMT2-211ENST00000554310 TSPAN18Q96SJ8 248 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 PYM1Q9BRP8 204 aaKnown RBP14.24□□□□□ -0.13
SHMT2-211ENST00000554310 MSTO1Q9BUK6 570 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 HAPLN2Q9GZV7 340 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 ADAM7Q9H2U9 754 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 GOLGA2P5Q9HBQ8 144 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 CD320Q9NPF0 282 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 FAM13BQ9NYF5 915 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 FNIP2Q9P278 1114 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 RCOR1Q9UKL0 485 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 PCDHA7Q9UN72 937 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 EXOC7Q9UPT5 735 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 ATP6V1DQ9Y5K8 247 aa14.24□□□□□ -0.13
SHMT2-211ENST00000554310 MTCL1Q9Y4B5 1905 aaKnown RBP14.23□□□□□ -0.13
SHMT2-211ENST00000554310 TTC26A0AVF1 554 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 PODXLO00592 558 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 TRAPPC3O43617 180 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 RPL9P32969 192 aaKnown RBP14.23□□□□□ -0.13
SHMT2-211ENST00000554310 KRT85P78386 507 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 AMPD3Q01432 767 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 SEZ6Q53EL9 994 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 HERC4Q5GLZ8 1057 aaPredicted RBP14.23□□□□□ -0.13
SHMT2-211ENST00000554310 RESP18Q5W5W9 173 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 SLFN12LQ6IEE8 588 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 CCDC65Q8IXS2 484 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 RIPOR3Q96MK2 946 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 STRA6Q9BX79 667 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 TRIM9Q9C026 710 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 PANK4Q9NVE7 773 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 STYXL1Q9Y6J8 313 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 C5orf42Q9H799 3197 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 TCHHQ07283 1943 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 ANK1P16157 1881 aa14.23□□□□□ -0.13
SHMT2-211ENST00000554310 C2orf16Q68DN1 1984 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 LOC730098B7Z3J9 87 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 GCNT3O95395 438 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 FGFR3P22607 806 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 TNFSF9P41273 254 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 MTHFRP42898 656 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 ENOX2Q16206 610 aaKnown RBP14.22□□□□□ -0.13
SHMT2-211ENST00000554310 PSMD5Q16401 504 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 RARS2Q5T160 578 aaKnown RBP14.22□□□□□ -0.13
SHMT2-211ENST00000554310 L1TD1Q5T7N2 865 aaKnown RBP14.22□□□□□ -0.13
SHMT2-211ENST00000554310 CNNM4Q6P4Q7 775 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 CEP57Q86XR8 500 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 CD302Q8IX05 232 aa14.22□□□□□ -0.13
SHMT2-211ENST00000554310 C3orf58Q8NDZ4 430 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms