RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 TNMDQ9H2S6 317 aa16.13■□□□□ 0.17
CCDC38-205ENST00000546947 ADAM7Q9H2U9 754 aa16.13■□□□□ 0.17
CCDC38-205ENST00000546947 PLEKHA5Q9HAU0 1116 aa16.13■□□□□ 0.17
CCDC38-205ENST00000546947 DPP7Q9UHL4 492 aa16.13■□□□□ 0.17
CCDC38-205ENST00000546947 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.13■□□□□ 0.17
CCDC38-205ENST00000546947 FRMD3A2A2Y4 597 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 OGTO15294 1046 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 PPP1R37O75864 691 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 B3GAT3O94766 335 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 DNM1Q05193 864 aaKnown RBP16.12■□□□□ 0.17
CCDC38-205ENST00000546947 CBX2Q14781 532 aaPredicted RBP16.12■□□□□ 0.17
CCDC38-205ENST00000546947 E2F4Q16254 413 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 SLC10A6Q3KNW5 377 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 SEZ6Q53EL9 994 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 ZC2HC1CQ53FD0 456 aaPredicted RBP16.12■□□□□ 0.17
CCDC38-205ENST00000546947 FAM171A1Q5VUB5 890 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 PDXDC1Q6P996 788 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 ELMSAN1Q6PJG2 1045 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 IQUBQ8NA54 791 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 RIN2Q8WYP3 895 aaPredicted RBP16.12■□□□□ 0.17
CCDC38-205ENST00000546947 NECTIN4Q96NY8 510 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 TTPALQ9BTX7 342 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 APOL5Q9BWW9 433 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 SFXN1Q9H9B4 322 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 MRPL44Q9H9J2 332 aaKnown RBP16.12■□□□□ 0.17
CCDC38-205ENST00000546947 GOLGA2P5Q9HBQ8 144 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 OLFML3Q9NRN5 406 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 KBTBD4Q9NVX7 518 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 PCDHA7Q9UN72 937 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 CUL9Q8IWT3 2517 aa16.12■□□□□ 0.17
CCDC38-205ENST00000546947 TCHHQ07283 1943 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 A0A0B4J269 797 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 LOC730098B7Z3J9 87 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 PODXLO00592 558 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 MEFVO15553 781 aaPredicted RBP16.11■□□□□ 0.17
CCDC38-205ENST00000546947 TRAPPC3O43617 180 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 GLUD1P00367 558 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 CXCL8P10145 99 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 IDEP14735 1019 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 RPL9P32969 192 aaKnown RBP16.11■□□□□ 0.17
CCDC38-205ENST00000546947 MTHFRP42898 656 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 ME1P48163 572 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 AMPD3Q01432 767 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 SOX4Q06945 474 aaPredicted RBP16.11■□□□□ 0.17
CCDC38-205ENST00000546947 ALCAMQ13740 583 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 BECN1Q14457 450 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 HERC4Q5GLZ8 1057 aaPredicted RBP16.11■□□□□ 0.17
CCDC38-205ENST00000546947 RTP2Q5QGT7 225 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 RARS2Q5T160 578 aaKnown RBP16.11■□□□□ 0.17
CCDC38-205ENST00000546947 SLFN12LQ6IEE8 588 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.11■□□□□ 0.17
CCDC38-205ENST00000546947 CCDC65Q8IXS2 484 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 PIK3R5Q8WYR1 880 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 DHX58Q96C10 678 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 B3GALT6Q96L58 329 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 RIPOR3Q96MK2 946 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 STRA6Q9BX79 667 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 MAGEF1Q9HAY2 307 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 PANK4Q9NVE7 773 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 FAM13BQ9NYF5 915 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 RCOR1Q9UKL0 485 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 ANK1P16157 1881 aa16.11■□□□□ 0.17
CCDC38-205ENST00000546947 TTC28Q96AY4 2481 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 DENND4AQ7Z401 1863 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 C2orf16Q68DN1 1984 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 TTC26A0AVF1 554 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 PI4K2BG5E9Z4 385 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 FAM189A1O60320 539 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 TNFSF9P41273 254 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 PPP2R3AQ06190 1150 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 L1TD1Q5T7N2 865 aaKnown RBP16.1■□□□□ 0.17
CCDC38-205ENST00000546947 SLC39A4Q6P5W5 647 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 CD300LGQ6UXG3 332 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 CEP57Q86XR8 500 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 CD302Q8IX05 232 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 C12orf76Q8N812 135 aaPredicted RBP16.1■□□□□ 0.17
CCDC38-205ENST00000546947 LNX1Q8TBB1 728 aaPredicted RBP16.1■□□□□ 0.17
CCDC38-205ENST00000546947 HDAC7Q8WUI4 952 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 TSPAN18Q96SJ8 248 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 PYM1Q9BRP8 204 aaKnown RBP16.1■□□□□ 0.17
CCDC38-205ENST00000546947 MSTO1Q9BUK6 570 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 RPF1Q9H9Y2 349 aaKnown RBP16.1■□□□□ 0.17
CCDC38-205ENST00000546947 EXOC7Q9UPT5 735 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 ZDHHC9Q9Y397 364 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 PCDHB13Q9Y5F0 798 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 STYXL1Q9Y6J8 313 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 NCOR1O75376 2440 aa16.1■□□□□ 0.17
CCDC38-205ENST00000546947 ANKRD63C9JTQ0 380 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 XPOTO43592 962 aaKnown RBP16.09■□□□□ 0.17
CCDC38-205ENST00000546947 GCNT3O95395 438 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 ADRB2P07550 413 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 FGFR3P22607 806 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 KRT85P78386 507 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 POU5F1Q01860 360 aaKnown RBP16.09■□□□□ 0.17
CCDC38-205ENST00000546947 POSTNQ15063 836 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 PSMD5Q16401 504 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 ATAT1Q5SQI0 421 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 RESP18Q5W5W9 173 aa16.09■□□□□ 0.17
CCDC38-205ENST00000546947 PRSS55Q6UWB4 352 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms