RNA–Protein interactions for RNA: ENST00000544506.1

LEMD3-205, Transcript of LEM domain containing 3, human

TSL 5

Gene LEMD3, Length 412 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LEMD3-205	ENST00000544506	NCAN	O14594	1321 aa		6.79	□□□□□ -1.32
LEMD3-205	ENST00000544506	PRRG2	O14669	202 aa		6.79	□□□□□ -1.32
LEMD3-205	ENST00000544506	FTL	P02792	175 aa	Predicted RBP	6.79	□□□□□ -1.32
LEMD3-205	ENST00000544506	CREM	Q03060	361 aa		6.79	□□□□□ -1.32
LEMD3-205	ENST00000544506	USP39	Q53GS9	565 aa	Known RBP	6.79	□□□□□ -1.32
LEMD3-205	ENST00000544506	UBE3B	Q7Z3V4	1068 aa		6.79	□□□□□ -1.32
LEMD3-205	ENST00000544506	SYT12	Q8IV01	421 aa		6.79	□□□□□ -1.32
LEMD3-205	ENST00000544506	TAAR9	Q96RI9	348 aa		6.79	□□□□□ -1.32
LEMD3-205	ENST00000544506	FBXO34	Q9NWN3	711 aa		6.79	□□□□□ -1.32
LEMD3-205	ENST00000544506	POGK	Q9P215	609 aa		6.79	□□□□□ -1.32
LEMD3-205	ENST00000544506	XDH	P47989	1333 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	TCRBV7S2A1N4T	A0A589	114 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	KIAA0391	O15091	583 aa	Known RBP	6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	SLC16A6	O15403	523 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	AMH	P03971	560 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	CD1A	P06126	327 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	U2AF1L5	P0DN76	240 aa	Predicted RBP	6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	MAL	P21145	153 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	MGAT1	P26572	445 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	APOBEC3A	P31941	199 aa	Predicted RBP	6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	MAP2K6	P52564	334 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	U2AF1	Q01081	240 aa	Known RBP eCLIP	6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	NOG	Q13253	232 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	ATP2B3	Q16720	1220 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	DACT2	Q5SW24	774 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	THEMIS2	Q5TEJ8	643 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	TMPRSS6	Q8IU80	811 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	WDR75	Q8IWA0	830 aa	Known RBP	6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	C3orf20	Q8ND61	904 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	IL17D	Q8TAD2	202 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	SLC35G2	Q8TBE7	412 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	EXTL1	Q92935	676 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	NDC1	Q9BTX1	674 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	KMT5A	Q9NQR1	393 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	CHPF2	Q9P2E5	772 aa		6.78	□□□□□ -1.32
LEMD3-205	ENST00000544506	GRXCR1	A8MXD5	290 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	LEFTY2	O00292	366 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	GRM6	O15303	877 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	POMC	P01189	267 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	ALDH2	P05091	517 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	ADRB1	P08588	477 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	SBK3	P0C264	359 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	BUD31	P41223	144 aa	Predicted RBP	6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	CHN2	P52757	468 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	HK3	P52790	923 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	PTTG1IP	P53801	180 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	KRTAP10-2	P60368	255 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	SNAPC2	Q13487	334 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	MINDY4	Q4G0A6	757 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	SLC4A10	Q6U841	1118 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	C1orf210	Q8IVY1	113 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	C1GALT1C1	Q96EU7	318 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	FAM30A	Q9NZY2	134 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	POLH	Q9Y253	713 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	PCDHA3	Q9Y5H8	950 aa		6.77	□□□□□ -1.33
LEMD3-205	ENST00000544506	DRGX	A6NNA5	263 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	PLSCR1	O15162	318 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	ITGB1	P05556	798 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	ALAS1	P13196	640 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	SLC6A2	P23975	617 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	NHLH2	Q02577	135 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	UBXN2B	Q14CS0	331 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	NRN1L	Q496H8	165 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	PABPC1L	Q4VXU2	614 aa	Known RBP	6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	RNF207	Q6ZRF8	634 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	MED25	Q71SY5	747 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	HEATR3	Q7Z4Q2	680 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	C14orf80	Q86SX3	495 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	DENND1C	Q8IV53	801 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	CAMKK1	Q8N5S9	505 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	RUNDC1	Q96C34	613 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	PHACTR3	Q96KR7	559 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	NEU1	Q99519	415 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	CGRRF1	Q99675	332 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	ACO2	Q99798	780 aa	Known RBP	6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	MAN1C1	Q9NR34	630 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	CEP72	Q9P209	647 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	EIF2B4	Q9UI10	523 aa	Known RBP	6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	SORCS3	Q9UPU3	1222 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	NR2E3	Q9Y5X4	410 aa		6.76	□□□□□ -1.33
LEMD3-205	ENST00000544506	NT5C1B-RDH14	C9J2C7	533 aa		6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	C1QTNF3-AMACR	E9PGA6	284 aa		6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	MYB	P10242	640 aa		6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	MTHFD1	P11586	935 aa	Known RBP	6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	SLC6A4	P31645	630 aa		6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	TOB2	Q14106	344 aa	Predicted RBP	6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	ZBTB34	Q8NCN2	500 aa		6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	PPP1R35	Q8TAP8	253 aa		6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	GPR20	Q99678	358 aa		6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	GSTO2	Q9H4Y5	243 aa		6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	LMBRD1	Q9NUN5	540 aa		6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	ABCF2	Q9UG63	623 aa		6.75	□□□□□ -1.33
LEMD3-205	ENST00000544506	CDHR4	A6H8M9	788 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506		H3BML4	177 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	F2RL2	O00254	374 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	TRIM24	O15164	1050 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	FAM20B	O75063	409 aa		6.74	□□□□□ -1.33
LEMD3-205	ENST00000544506	HAUS5	O94927	633 aa		6.74	□□□□□ -1.33

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