RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 RILPL1Q5EBL4 403 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 RCSD1Q6JBY9 416 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 TMC3Q7Z5M5 1100 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 NOSTRINQ8IVI9 506 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 ANKRD52Q8NB46 1076 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 SPPL3Q8TCT6 385 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 HERVK_113Q902F9 699 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 MUL1Q969V5 352 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 DACT3Q96B18 629 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-209ENST00000540819 HHIPL1Q96JK4 782 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 MSLNLQ96KJ4 702 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 MYCBPQ99417 103 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-209ENST00000540819 MRPL9Q9BYD2 267 aaKnown RBP6.13□□□□□ -1.43
PRKDC-209ENST00000540819 ZMAT3Q9HA38 289 aaKnown RBP6.13□□□□□ -1.43
PRKDC-209ENST00000540819 PLSCR4Q9NRQ2 329 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 ORC3Q9UBD5 711 aaPredicted RBP6.13□□□□□ -1.43
PRKDC-209ENST00000540819 SLC39A10Q9ULF5 831 aa6.13□□□□□ -1.43
PRKDC-209ENST00000540819 CFAP20Q9Y6A4 193 aaKnown RBP6.13□□□□□ -1.43
PRKDC-209ENST00000540819 CCDC196A0A1B0GTZ2 297 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 WTIPA6NIX2 430 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-209ENST00000540819 IPO5O00410 1097 aaKnown RBP6.12□□□□□ -1.43
PRKDC-209ENST00000540819 USO1O60763 962 aaKnown RBP6.12□□□□□ -1.43
PRKDC-209ENST00000540819 TMEM127O75204 238 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 FTLP02792 175 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-209ENST00000540819 AMY2AP04746 511 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 CLEC2LP0C7M8 214 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 HNRNPLP14866 589 aaKnown RBP eCLIP6.12□□□□□ -1.43
PRKDC-209ENST00000540819 ALOX15P16050 662 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-209ENST00000540819 ALOX12P18054 663 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 AMY2BP19961 511 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 ENDOUP21128 410 aaKnown RBP6.12□□□□□ -1.43
PRKDC-209ENST00000540819 EPHB3P54753 998 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 VAMP2P63027 116 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 YBX1P67809 324 aaKnown RBP6.12□□□□□ -1.43
PRKDC-209ENST00000540819 LSAMPQ13449 338 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 LAPTM5Q13571 262 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 DCTN1Q14203 1278 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 CCDC157Q569K6 752 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 EEF1DP3Q658K8 133 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 TANGO2Q6ICL3 276 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 CNKSR3Q6P9H4 555 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 LMBR1LQ6UX01 489 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 DBX2Q6ZNG2 339 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 ESPNLQ6ZVH7 1005 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 KRT74Q7RTS7 529 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 NME9Q86XW9 330 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 CPOQ8IVL8 374 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 PLBD2Q8NHP8 589 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 IL31RAQ8NI17 732 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 ADAMTS15Q8TE58 950 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 MZB1Q8WU39 189 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 RTF1Q92541 710 aaKnown RBP6.12□□□□□ -1.43
PRKDC-209ENST00000540819 HTRA1Q92743 480 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 DLG3Q92796 817 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 RGMAQ96B86 450 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 RADILQ96JH8 1075 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 MAML3Q96JK9 1138 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 ANO3Q9BYT9 981 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 SENP6Q9GZR1 1112 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-209ENST00000540819 PREBQ9HCU5 417 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 ITGB1BP2Q9UKP3 347 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 B3GALT1Q9Y5Z6 326 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 TAF6LQ9Y6J9 622 aa6.12□□□□□ -1.43
PRKDC-209ENST00000540819 TMEM82A0PJX8 343 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 DAPK3O43293 454 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 TADA3O75528 432 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 PRAMEF1O95521 474 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 SLC3A2P08195 630 aaKnown RBP6.11□□□□□ -1.43
PRKDC-209ENST00000540819 STAT5AP42229 794 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 SNX16P57768 344 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 FMO1Q01740 532 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 MAPK7Q13164 816 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 PTK2BQ14289 1009 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 KRT32Q14532 448 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 CNGA2Q16280 664 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 ADCK5Q3MIX3 580 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 PITRM1Q5JRX3 1037 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 ANKRD45Q5TZF3 282 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 CYP4F22Q6NT55 531 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 CCDC62Q6P9F0 684 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 ZPBP2Q6X784 338 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 ARHGAP36Q6ZRI8 547 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 MOGAT3Q86VF5 341 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 TXLNBQ8N3L3 684 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 ATP11CQ8NB49 1132 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 FANCBQ8NB91 859 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 SSH3Q8TE77 659 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 MTFMTQ96DP5 389 aaKnown RBP6.11□□□□□ -1.43
PRKDC-209ENST00000540819 RRP36Q96EU6 259 aaKnown RBP6.11□□□□□ -1.43
PRKDC-209ENST00000540819 FCRL2Q96LA5 508 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-209ENST00000540819 C16orf92Q96LL3 132 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 FCRL3Q96P31 734 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-209ENST00000540819 KCNJ15Q99712 375 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 CDIP1Q9H305 208 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 C14orf93Q9H972 538 aaKnown RBP6.11□□□□□ -1.43
PRKDC-209ENST00000540819 DBNDD1Q9H9R9 158 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 TM7SF3Q9NS93 570 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 KIF17Q9P2E2 1029 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 MYO1AQ9UBC5 1043 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms