RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ALDH5A1P51649 535 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-208ENST00000536710 SLURP1P55000 103 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 NFYCQ13952 458 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 FAM47AQ5JRC9 791 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 MFSD14BQ5SR56 506 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 CIAPIN1Q6FI81 312 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 XRRA1Q6P2D8 792 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 BORAQ6PGQ7 559 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 C1orf228Q6PIY5 440 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 PPP1R3BQ86XI6 285 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 KRT78Q8N1N4 520 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 CELF5Q8N6W0 485 aaKnown RBP6.66□□□□□ -1.34
PRKDC-208ENST00000536710 DCBLD1Q8N8Z6 715 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 TP53I13Q8NBR0 393 aaPredicted RBP6.66□□□□□ -1.34
PRKDC-208ENST00000536710 IL31RAQ8NI17 732 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 PGBD4Q96DM1 585 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 C1orf43Q9BWL3 253 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 ZNF287Q9HBT7 754 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 GNL3LQ9NVN8 582 aaKnown RBP6.66□□□□□ -1.34
PRKDC-208ENST00000536710 SLC4A7Q9Y6M7 1214 aa6.66□□□□□ -1.34
PRKDC-208ENST00000536710 NT5C1B-RDH14C9J2C7 533 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 WNT10BO00744 389 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 GRM6O15303 877 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 FRS3O43559 492 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 AHSGP02765 367 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 ZKSCAN1P17029 563 aaPredicted RBP6.65□□□□□ -1.34
PRKDC-208ENST00000536710 KCNJ5P48544 419 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 PRIM2P49643 509 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 ADAM8P78325 824 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 RIN1Q13671 783 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 OGFOD2Q6N063 350 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 TOGARAM2Q6ZUX3 1019 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 ADGRE4PQ86SQ3 457 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 PLXDC1Q8IUK5 500 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 SHCBP1Q8NEM2 672 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 PHKBQ93100 1093 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 MYOCQ99972 504 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 DPYSL5Q9BPU6 564 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 TCF25Q9BQ70 676 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 MRI1Q9BV20 369 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 MRPL46Q9H2W6 279 aaKnown RBP6.65□□□□□ -1.34
PRKDC-208ENST00000536710 PLCB1Q9NQ66 1216 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 PIH1D1Q9NWS0 290 aaKnown RBP6.65□□□□□ -1.34
PRKDC-208ENST00000536710 FNIP2Q9P278 1114 aa6.65□□□□□ -1.34
PRKDC-208ENST00000536710 USP19O94966 1318 aa6.65□□□□□ -1.35
PRKDC-208ENST00000536710 CDC14BO60729 498 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 GNAI3P08754 354 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 MTHFD1P11586 935 aaKnown RBP6.64□□□□□ -1.35
PRKDC-208ENST00000536710 NPR1P16066 1061 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 PHKA1P46020 1223 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 KCNC1P48547 511 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 PIK3CGP48736 1102 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 RAP2BP61225 183 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 GNAI1P63096 354 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 FAM214AQ32MH5 1076 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 ENAHQ8N8S7 591 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-208ENST00000536710 PCSK9Q8NBP7 692 aaKnown RBP6.64□□□□□ -1.35
PRKDC-208ENST00000536710 BHLHE22Q8NFJ8 381 aaPredicted RBP6.64□□□□□ -1.35
PRKDC-208ENST00000536710 CFHR4Q92496 578 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 ANKS1AQ92625 1134 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 LRRC37BQ96QE4 947 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 PACSIN1Q9BY11 444 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 BTBD1Q9H0C5 482 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 ATRNL1Q5VV63 1379 aa6.64□□□□□ -1.35
PRKDC-208ENST00000536710 TCRBV7S2A1N4TA0A589 114 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 CXorf49A8MYA2 514 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-208ENST00000536710 B4GALT3O60512 393 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 SBK3P0C264 359 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 SETSIPP0DME0 302 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 TM4SF4P48230 202 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 SUMO3P55854 103 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-208ENST00000536710 SOX8P57073 446 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 EXOSC9Q06265 439 aaKnown RBP6.63□□□□□ -1.35
PRKDC-208ENST00000536710 CHAF1AQ13111 956 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-208ENST00000536710 MRPL49Q13405 166 aaKnown RBP6.63□□□□□ -1.35
PRKDC-208ENST00000536710 CNGA2Q16280 664 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 PABPC1LQ4VXU2 614 aaKnown RBP6.63□□□□□ -1.35
PRKDC-208ENST00000536710 CCDC93Q567U6 631 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 NT5DC1Q5TFE4 455 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 ZNF529Q6P280 563 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 ARHGEF18Q6ZSZ5 1173 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 UBE3BQ7Z3V4 1068 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 PLEKHH3Q7Z736 793 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 FAM90A1Q86YD7 464 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 SLC35B2Q8TB61 432 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 NEIL1Q96FI4 390 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-208ENST00000536710 RIPOR3Q96MK2 946 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 RSAD1Q9HA92 442 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.63□□□□□ -1.35
PRKDC-208ENST00000536710 CPNE7Q9UBL6 633 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 HDAC5Q9UQL6 1122 aa6.63□□□□□ -1.35
PRKDC-208ENST00000536710 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.63□□□□□ -1.35
PRKDC-208ENST00000536710 RASA4BC9J798 803 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 MATN2O00339 956 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 IFRD1O00458 451 aaPredicted RBP6.62□□□□□ -1.35
PRKDC-208ENST00000536710 TBX3O15119 743 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 RASA4O43374 803 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 STC2O76061 302 aa6.62□□□□□ -1.35
PRKDC-208ENST00000536710 CNOT4O95628 575 aaKnown RBP6.62□□□□□ -1.35
PRKDC-208ENST00000536710 SNRPA1P09661 255 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms