RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SOX4Q06945 474 aaPredicted RBP16.77■□□□□ 0.28
CPSF1-210ENST00000532935 KYAT1Q16773 422 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 KIAA1841Q6NSI8 718 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 SYCE2Q6PIF2 218 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 PPFIBP1Q86W92 1011 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 CCDC65Q8IXS2 484 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 SLC22A17Q8WUG5 538 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 B3GALT6Q96L58 329 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 SPATA32Q96LK8 384 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 MSTO1Q9BUK6 570 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 MAGEF1Q9HAY2 307 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 GOLGA2P5Q9HBQ8 144 aa16.77■□□□□ 0.28
CPSF1-210ENST00000532935 USP15Q9Y4E8 981 aaPredicted RBP16.77■□□□□ 0.28
CPSF1-210ENST00000532935 C2orf16Q68DN1 1984 aa16.77■□□□□ 0.27
CPSF1-210ENST00000532935 ANKRD63C9JTQ0 380 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 TMEM189-UBE2V1I3L0A0 370 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 FAM189A1O60320 539 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 GCNT3O95395 438 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 EPCAMP16422 314 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 HOXB8P17481 243 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-210ENST00000532935 TNFSF9P41273 254 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 CLCN4P51793 760 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 CASP5P51878 434 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 UPP1Q16831 310 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 ZBTB41Q5SVQ8 909 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 DCLRE1AQ6PJP8 1040 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 GPR65Q8IYL9 337 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 RIN2Q8WYP3 895 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-210ENST00000532935 C18orf25Q96B23 403 aaPredicted RBP16.76■□□□□ 0.27
CPSF1-210ENST00000532935 APOL5Q9BWW9 433 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 FGFBP2Q9BYJ0 223 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 TRIM9Q9C026 710 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 S1PR5Q9H228 398 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 PLEKHA5Q9HAU0 1116 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 RXFP1Q9HBX9 757 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 DZANK1Q9NVP4 752 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 PRKAG3Q9UGI9 489 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 PCDHB13Q9Y5F0 798 aa16.76■□□□□ 0.27
CPSF1-210ENST00000532935 TTC26A0AVF1 554 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 TISP43B9A030 160 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 TEX28O15482 410 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 B3GAT3O94766 335 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 ADH1AP07327 375 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 MYBP10242 640 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 IGFBP6P24592 240 aaPredicted RBP16.75■□□□□ 0.27
CPSF1-210ENST00000532935 ZP2Q05996 745 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 KCNA1Q09470 495 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 ELAVL2Q12926 359 aaKnown RBP16.75■□□□□ 0.27
CPSF1-210ENST00000532935 ALCAMQ13740 583 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 TPRNQ4KMQ1 711 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 RTP2Q5QGT7 225 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 L1TD1Q5T7N2 865 aaKnown RBP16.75■□□□□ 0.27
CPSF1-210ENST00000532935 FAM171A1Q5VUB5 890 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 ADALQ6DHV7 355 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 SLFN12LQ6IEE8 588 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 CNNM4Q6P4Q7 775 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 ADHFE1Q8IWW8 467 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 SUSD6Q92537 303 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 DDX27Q96GQ7 796 aaKnown RBP16.75■□□□□ 0.27
CPSF1-210ENST00000532935 IPO9Q96P70 1041 aaKnown RBP16.75■□□□□ 0.27
CPSF1-210ENST00000532935 ACCSQ96QU6 501 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 C7orf25Q9BPX7 421 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 PYM1Q9BRP8 204 aaKnown RBP16.75■□□□□ 0.27
CPSF1-210ENST00000532935 TTPALQ9BTX7 342 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 IKZF4Q9H2S9 585 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 RPF1Q9H9Y2 349 aaKnown RBP16.75■□□□□ 0.27
CPSF1-210ENST00000532935 CD320Q9NPF0 282 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.75■□□□□ 0.27
CPSF1-210ENST00000532935 KCNH3Q9ULD8 1083 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 STYXL1Q9Y6J8 313 aa16.75■□□□□ 0.27
CPSF1-210ENST00000532935 PODXLO00592 558 aa16.74■□□□□ 0.27
CPSF1-210ENST00000532935 ASIC1P78348 528 aa16.74■□□□□ 0.27
CPSF1-210ENST00000532935 PPP2R3AQ06190 1150 aa16.74■□□□□ 0.27
CPSF1-210ENST00000532935 ENOX2Q16206 610 aaKnown RBP16.74■□□□□ 0.27
CPSF1-210ENST00000532935 CD300LGQ6UXG3 332 aa16.74■□□□□ 0.27
CPSF1-210ENST00000532935 CEP57Q86XR8 500 aa16.74■□□□□ 0.27
CPSF1-210ENST00000532935 GJD3Q8N144 294 aa16.74■□□□□ 0.27
CPSF1-210ENST00000532935 C3orf58Q8NDZ4 430 aa16.74■□□□□ 0.27
CPSF1-210ENST00000532935 FBXL18Q96ME1 805 aa16.74■□□□□ 0.27
CPSF1-210ENST00000532935 SCAND2PQ9GZW5 306 aaPredicted RBP16.74■□□□□ 0.27
CPSF1-210ENST00000532935 FNIP2Q9P278 1114 aa16.74■□□□□ 0.27
CPSF1-210ENST00000532935 CPSF3Q9UKF6 684 aaKnown RBP16.74■□□□□ 0.27
CPSF1-210ENST00000532935 AGO2Q9UKV8 859 aaKnown RBP16.74■□□□□ 0.27
CPSF1-210ENST00000532935 EXOC7Q9UPT5 735 aa16.74■□□□□ 0.27
CPSF1-210ENST00000532935 DENND4AQ7Z401 1863 aa16.73■□□□□ 0.27
CPSF1-210ENST00000532935 LACTBL1A8MY62 500 aa16.73■□□□□ 0.27
CPSF1-210ENST00000532935 ADRB2P07550 413 aa16.73■□□□□ 0.27
CPSF1-210ENST00000532935 PFKFB1P16118 471 aa16.73■□□□□ 0.27
CPSF1-210ENST00000532935 CMA1P23946 247 aa16.73■□□□□ 0.27
CPSF1-210ENST00000532935 SSTR3P32745 418 aaPredicted RBP16.73■□□□□ 0.27
CPSF1-210ENST00000532935 RPL9P32969 192 aaKnown RBP16.73■□□□□ 0.27
CPSF1-210ENST00000532935 CREMQ03060 361 aa16.73■□□□□ 0.27
CPSF1-210ENST00000532935 SPAG1Q07617 926 aa16.73■□□□□ 0.27
CPSF1-210ENST00000532935 POSTNQ15063 836 aa16.73■□□□□ 0.27
CPSF1-210ENST00000532935 PRSS55Q6UWB4 352 aaPredicted RBP16.73■□□□□ 0.27
CPSF1-210ENST00000532935 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.73■□□□□ 0.27
CPSF1-210ENST00000532935 CEP57L1Q8IYX8 460 aa16.73■□□□□ 0.27
CPSF1-210ENST00000532935 C12orf76Q8N812 135 aaPredicted RBP16.73■□□□□ 0.27
CPSF1-210ENST00000532935 PIK3R5Q8WYR1 880 aa16.73■□□□□ 0.27
CPSF1-210ENST00000532935 POMGNT1Q8WZA1 660 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms