RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 SETD4Q9NVD3 440 aa16.62■□□□□ 0.25
CCDC90B-213ENST00000529611 TSKSQ9UJT2 592 aa16.62■□□□□ 0.25
CCDC90B-213ENST00000529611 ABT1Q9ULW3 272 aaKnown RBP16.62■□□□□ 0.25
CCDC90B-213ENST00000529611 PDE2AO00408 941 aaPredicted RBP16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 ABCB4P21439 1286 aa16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 TM4SF4P48230 202 aa16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 PDE6CP51160 858 aa16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 FMO1Q01740 532 aa16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 CKAP4Q07065 602 aaKnown RBP16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 NCOA4Q13772 614 aa16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 MEI1Q5TIA1 1274 aa16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 SCARA3Q6AZY7 606 aa16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 NOA1Q8NC60 698 aaKnown RBP16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 TPCN2Q8NHX9 752 aa16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 CTNNBL1Q8WYA6 563 aaPredicted RBP16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 RFFLQ8WZ73 363 aa16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 FAM212AQ96EL1 285 aa16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 PSMB7Q99436 277 aa16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 ISCUQ9H1K1 167 aa16.61■□□□□ 0.25
CCDC90B-213ENST00000529611 ANKRD62A6NC57 917 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 RRN3P2A6NIE6 340 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 GPR25O00155 361 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 ZEB2O60315 1214 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 MMEP08473 750 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 KRT5P13647 590 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 CXCR5P32302 372 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 NOP14P78316 857 aaKnown RBP16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 SURF1Q15526 300 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 MTERF4Q7Z6M4 381 aaKnown RBP16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 NLRP7Q8WX94 980 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 DDX1Q92499 740 aaKnown RBP16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 MTMR12Q9C0I1 747 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 THAP2Q9H0W7 228 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 FAM170AA1A519 330 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 CA12O43570 354 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 PHACTR2O75167 634 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 SMIM10L2AP0DMW4 78 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 SMIM10L2BP0DMW5 78 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 OSTNP61366 133 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 TUBB4BP68371 445 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 CDR2Q01850 454 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 CUL2Q13617 745 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 TMEM192Q8IY95 271 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 ARHGEF26Q96DR7 871 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 GOLPH3Q9H4A6 298 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 PDZD7Q9H5P4 517 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 OSGEPQ9NPF4 335 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 NUB1Q9Y5A7 615 aa16.6■□□□□ 0.25
CCDC90B-213ENST00000529611 ANK1P16157 1881 aa16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 UMODL1Q5DID0 1318 aa16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 CST3P01034 146 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 FTLP02792 175 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 CLTAP09496 248 aa16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 GZMAP12544 262 aa16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 ARF4P18085 180 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 ACO1P21399 889 aaKnown RBP16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 DUOXA2Q1HG44 320 aa16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 ZNF410Q86VK4 478 aa16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 EFCAB13Q8IY85 973 aa16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 SLC35G2Q8TBE7 412 aa16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 CAGE1Q8TC20 777 aa16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 PPP1R13LQ8WUF5 828 aa16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 CPB2Q96IY4 423 aa16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 PACSIN2Q9UNF0 486 aaPredicted RBP16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 NRCAMQ92823 1304 aa16.59■□□□□ 0.25
CCDC90B-213ENST00000529611 B4GALT4O60513 344 aa16.58■□□□□ 0.25
CCDC90B-213ENST00000529611 RTN2O75298 545 aa16.58■□□□□ 0.25
CCDC90B-213ENST00000529611 ASS1P00966 412 aaKnown RBP16.58■□□□□ 0.25
CCDC90B-213ENST00000529611 CXCL8P10145 99 aa16.58■□□□□ 0.25
CCDC90B-213ENST00000529611 MCF2P10911 925 aa16.58■□□□□ 0.25
CCDC90B-213ENST00000529611 SLFN11Q7Z7L1 901 aa16.58■□□□□ 0.25
CCDC90B-213ENST00000529611 RPGRIP1Q96KN7 1286 aa16.58■□□□□ 0.25
CCDC90B-213ENST00000529611 SCLT1Q96NL6 688 aa16.58■□□□□ 0.25
CCDC90B-213ENST00000529611 ANKZF1Q9H8Y5 726 aa16.58■□□□□ 0.25
CCDC90B-213ENST00000529611 Q9Y3F1 56 aa16.58■□□□□ 0.25
CCDC90B-213ENST00000529611 CENPFP49454 3210 aa16.58■□□□□ 0.25
CCDC90B-213ENST00000529611 MGAMO43451 1857 aa16.58■□□□□ 0.24
CCDC90B-213ENST00000529611 TSPAN1O60635 241 aa16.58■□□□□ 0.24
CCDC90B-213ENST00000529611 CALCAP01258 141 aa16.58■□□□□ 0.24
CCDC90B-213ENST00000529611 TBXAS1P24557 533 aaPredicted RBP16.58■□□□□ 0.24
CCDC90B-213ENST00000529611 CPT1AP50416 773 aa16.58■□□□□ 0.24
CCDC90B-213ENST00000529611 MFSD10Q14728 455 aa16.58■□□□□ 0.24
CCDC90B-213ENST00000529611 ZNF572Q7Z3I7 529 aaPredicted RBP16.58■□□□□ 0.24
CCDC90B-213ENST00000529611 HHIPL1Q96JK4 782 aa16.58■□□□□ 0.24
CCDC90B-213ENST00000529611 PARD6BQ9BYG5 372 aa16.58■□□□□ 0.24
CCDC90B-213ENST00000529611 IMPG2Q9BZV3 1241 aa16.58■□□□□ 0.24
CCDC90B-213ENST00000529611 RPF1Q9H9Y2 349 aaKnown RBP16.58■□□□□ 0.24
CCDC90B-213ENST00000529611 MBLAC1A4D2B0 266 aaPredicted RBP16.57■□□□□ 0.24
CCDC90B-213ENST00000529611 HAS3O00219 553 aa16.57■□□□□ 0.24
CCDC90B-213ENST00000529611 STAG3L1P0CL83 205 aa16.57■□□□□ 0.24
CCDC90B-213ENST00000529611 CLCN6P51797 869 aa16.57■□□□□ 0.24
CCDC90B-213ENST00000529611 TFAMQ00059 246 aaKnown RBP16.57■□□□□ 0.24
CCDC90B-213ENST00000529611 BEX3Q00994 111 aa16.57■□□□□ 0.24
CCDC90B-213ENST00000529611 KIZQ2M2Z5 673 aa16.57■□□□□ 0.24
CCDC90B-213ENST00000529611 MSANTD4Q8NCY6 345 aa16.57■□□□□ 0.24
CCDC90B-213ENST00000529611 AP5M1Q9H0R1 490 aa16.57■□□□□ 0.24
CCDC90B-213ENST00000529611 ADAMTS10Q9H324 1103 aa16.57■□□□□ 0.24
CCDC90B-213ENST00000529611 GPBP1L1Q9HC44 474 aaPredicted RBP16.57■□□□□ 0.24
CCDC90B-213ENST00000529611 PCDHB2Q9Y5E7 798 aa16.57■□□□□ 0.24
CCDC90B-213ENST00000529611 TMEM88BA6NKF7 163 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms