RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 POGKQ9P215 609 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 DDX20Q9UHI6 824 aaKnown RBP6.05□□□□□ -1.44
CTR9-204ENST00000529355 TCEAL9Q9UHQ7 104 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 SLC45A2Q9UMX9 530 aa6.05□□□□□ -1.44
CTR9-204ENST00000529355 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 B5MCH6 92 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 KIAA0391O15091 583 aaKnown RBP6.04□□□□□ -1.44
CTR9-204ENST00000529355 C1SP09871 688 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 CHN2P52757 468 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 CTXN1P60606 82 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 FAM189BP81408 668 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 SLC25A3Q00325 362 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 CRHR2Q13324 411 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 UBXN2BQ14CS0 331 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 MLC1Q15049 377 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 SPATS1Q496A3 300 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 ATXN7L2Q5T6C5 722 aaPredicted RBP6.04□□□□□ -1.44
CTR9-204ENST00000529355 OTUD7BQ6GQQ9 843 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 EFCAB12Q6NXP0 572 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 PLXDC1Q8IUK5 500 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 SH2D3CQ8N5H7 860 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 CELF5Q8N6W0 485 aaKnown RBP6.04□□□□□ -1.44
CTR9-204ENST00000529355 PLBD2Q8NHP8 589 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 SH3RF3Q8TEJ3 882 aaPredicted RBP6.04□□□□□ -1.44
CTR9-204ENST00000529355 CLIP3Q96DZ5 547 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 TAAR9Q96RI9 348 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 LRFN3Q9BTN0 628 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 NDC1Q9BTX1 674 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 MOCS1Q9NZB8 636 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 CEP72Q9P209 647 aa6.04□□□□□ -1.44
CTR9-204ENST00000529355 CFAP20Q9Y6A4 193 aaKnown RBP6.04□□□□□ -1.44
CTR9-204ENST00000529355 A6NNZ2 444 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 AHRRA9YTQ3 701 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 GRM6O15303 877 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 SGTAO43765 313 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 OFD1O75665 1012 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 IPO13O94829 963 aaKnown RBP6.03□□□□□ -1.44
CTR9-204ENST00000529355 MALP21145 153 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 ACRV1P26436 265 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 MAN2A2P49641 1150 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 NHLH2Q02577 135 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 SEM1Q6ZVN7 128 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 HTR3DQ70Z44 454 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 MED25Q71SY5 747 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 TTC7BQ86TV6 843 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 TCEAL8Q8IYN2 117 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 MYO1HQ8N1T3 1032 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 MAGEB6Q8N7X4 407 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 ZBTB34Q8NCN2 500 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 CGRRF1Q99675 332 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 C1orf43Q9BWL3 253 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 GSTO2Q9H4Y5 243 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 METTL14Q9HCE5 456 aaKnown RBP6.03□□□□□ -1.44
CTR9-204ENST00000529355 VSX1Q9NZR4 365 aaPredicted RBP6.03□□□□□ -1.44
CTR9-204ENST00000529355 CHPF2Q9P2E5 772 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 SORCS3Q9UPU3 1222 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 TSC22D4Q9Y3Q8 395 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 NR2E3Q9Y5X4 410 aa6.03□□□□□ -1.44
CTR9-204ENST00000529355 NT5C1B-RDH14C9J2C7 533 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 F2RL2O00254 374 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 PJA2O43164 708 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 FTLP02792 175 aaPredicted RBP6.02□□□□□ -1.45
CTR9-204ENST00000529355 ITGB1P05556 798 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 SNRPA1P09661 255 aaKnown RBP6.02□□□□□ -1.45
CTR9-204ENST00000529355 ZFP36P26651 326 aaKnown RBP6.02□□□□□ -1.45
CTR9-204ENST00000529355 PHKA1P46020 1223 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 RNASE9P60153 205 aaKnown RBP6.02□□□□□ -1.45
CTR9-204ENST00000529355 PTH1RQ03431 593 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 NOGQ13253 232 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 CNGB1Q14028 1251 aaPredicted RBP6.02□□□□□ -1.45
CTR9-204ENST00000529355 TOB2Q14106 344 aaPredicted RBP6.02□□□□□ -1.45
CTR9-204ENST00000529355 NRN1LQ496H8 165 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 C1orf210Q8IVY1 113 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 TTC8Q8TAM2 541 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 RGMAQ96B86 450 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 AIFM3Q96NN9 605 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 NT5C1BQ96P26 610 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 MAP3K14Q99558 947 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 C11orf54Q9H0W9 315 aaPredicted RBP6.02□□□□□ -1.45
CTR9-204ENST00000529355 ARMT1Q9H993 441 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 TESMINQ9Y4I5 508 aa6.02□□□□□ -1.45
CTR9-204ENST00000529355 CDHR4A6H8M9 788 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 PRSS29PA6NIE9 313 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 CD1AP06126 327 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 NR4A1P22736 598 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 HK3P52790 923 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 DCAF17Q5H9S7 520 aaPredicted RBP6.01□□□□□ -1.45
CTR9-204ENST00000529355 FAM102AQ5T9C2 384 aaPredicted RBP6.01□□□□□ -1.45
CTR9-204ENST00000529355 NAIF1Q69YI7 327 aaPredicted RBP6.01□□□□□ -1.45
CTR9-204ENST00000529355 IGFL4Q6B9Z1 124 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 GADL1Q6ZQY3 521 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 HEATR3Q7Z4Q2 680 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 GGNQ86UU5 652 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 TMPRSS6Q8IU80 811 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 ZFPM1Q8IX07 1006 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 RUNDC1Q96C34 613 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 NMRK2Q9NPI5 230 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 ABCF2Q9UG63 623 aa6.01□□□□□ -1.45
CTR9-204ENST00000529355 VSTM5A8MXK1 200 aa6□□□□□ -1.45
CTR9-204ENST00000529355 POMCP01189 267 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms