RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PLAGL2Q9UPG8 496 aa26.74■■□□□ 1.87
LDLRAD3-203ENST00000528989 SIK3Q9Y2K2 1263 aa26.74■■□□□ 1.87
LDLRAD3-203ENST00000528989 EVI5O60447 810 aa26.74■■□□□ 1.87
LDLRAD3-203ENST00000528989 GUCY2FP51841 1108 aa26.74■■□□□ 1.87
LDLRAD3-203ENST00000528989 SEMA4DQ92854 862 aa26.74■■□□□ 1.87
LDLRAD3-203ENST00000528989 ERGIC2Q96RQ1 377 aa26.74■■□□□ 1.87
LDLRAD3-203ENST00000528989 MIOSQ9NXC5 875 aa26.74■■□□□ 1.87
LDLRAD3-203ENST00000528989 CNTN3Q9P232 1028 aa26.74■■□□□ 1.87
LDLRAD3-203ENST00000528989 SMIM28A0A1B0GU29 152 aa26.73■■□□□ 1.87
LDLRAD3-203ENST00000528989 ACTN1P12814 892 aa26.73■■□□□ 1.87
LDLRAD3-203ENST00000528989 RFC2P35250 354 aa26.73■■□□□ 1.87
LDLRAD3-203ENST00000528989 SURF1Q15526 300 aa26.73■■□□□ 1.87
LDLRAD3-203ENST00000528989 DUOXA2Q1HG44 320 aa26.73■■□□□ 1.87
LDLRAD3-203ENST00000528989 ZACNQ401N2 412 aa26.73■■□□□ 1.87
LDLRAD3-203ENST00000528989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.73■■□□□ 1.87
LDLRAD3-203ENST00000528989 TMC6Q7Z403 805 aa26.73■■□□□ 1.87
LDLRAD3-203ENST00000528989 DRC7Q8IY82 874 aa26.73■■□□□ 1.87
LDLRAD3-203ENST00000528989 DPF3Q92784 378 aa26.73■■□□□ 1.87
LDLRAD3-203ENST00000528989 C18orf25Q96B23 403 aaPredicted RBP26.73■■□□□ 1.87
LDLRAD3-203ENST00000528989 ARL5CA6NH57 179 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 CST3P01034 146 aaPredicted RBP26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 GTF2H1P32780 548 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 EXOC3L4Q17RC7 722 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 XKR4Q5GH76 650 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 HTATIP2Q9BUP3 242 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 GCNT4Q9P109 453 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 ZMYND8Q9ULU4 1186 aaPredicted RBP26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 PTGESO14684 152 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 EPHB6O15197 1021 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 STX10O60499 249 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 VNN1O95497 513 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 PON1P27169 355 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 BIRC3Q13489 604 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 TMEM132DQ14C87 1099 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 CNKSR3Q6P9H4 555 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 C16orf59Q7L2K0 433 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 TRAPPC11Q7Z392 1133 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 LMO3Q8TAP4 145 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 PCMTD1Q96MG8 357 aaPredicted RBP26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 C1orf112Q9NSG2 853 aa26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 FAM207AQ9NSI2 230 aaPredicted RBP26.72■■□□□ 1.87
LDLRAD3-203ENST00000528989 A0A1W2PQC6 194 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 TMEM191BP0C7N4 346 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 FGFR1P11362 822 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 SKIP12755 728 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 IKBKEQ14164 716 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 SPECC1LQ69YQ0 1117 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 DPY19L2P1Q6NXN4 242 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 GBP6Q6ZN66 633 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 HACE1Q8IYU2 909 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 PI4K2AQ9BTU6 479 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 RSAD1Q9HA92 442 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 GIT1Q9Y2X7 761 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 ANK1P16157 1881 aa26.71■■□□□ 1.87
LDLRAD3-203ENST00000528989 TRIP11Q15643 1979 aa26.7■■□□□ 1.87
LDLRAD3-203ENST00000528989 ZBTB6Q15916 424 aa26.7■■□□□ 1.87
LDLRAD3-203ENST00000528989 EPC2Q52LR7 807 aa26.7■■□□□ 1.87
LDLRAD3-203ENST00000528989 CD302Q8IX05 232 aa26.7■■□□□ 1.87
LDLRAD3-203ENST00000528989 C1orf127Q8N9H9 656 aa26.7■■□□□ 1.87
LDLRAD3-203ENST00000528989 PGBD4Q96DM1 585 aa26.7■■□□□ 1.87
LDLRAD3-203ENST00000528989 TUBGCP4Q9UGJ1 667 aa26.7■■□□□ 1.87
LDLRAD3-203ENST00000528989 C2CD2Q9Y426 696 aa26.7■■□□□ 1.87
LDLRAD3-203ENST00000528989 CITO14578 2027 aa26.7■■□□□ 1.86
LDLRAD3-203ENST00000528989 EOMESO95936 686 aa26.7■■□□□ 1.86
LDLRAD3-203ENST00000528989 CDC25BP30305 580 aa26.7■■□□□ 1.86
LDLRAD3-203ENST00000528989 FBXL13Q8NEE6 735 aa26.7■■□□□ 1.86
LDLRAD3-203ENST00000528989 ANKRD36BP1Q96IX9 119 aa26.7■■□□□ 1.86
LDLRAD3-203ENST00000528989 INPP5FQ9Y2H2 1132 aa26.7■■□□□ 1.86
LDLRAD3-203ENST00000528989 COQ4Q9Y3A0 265 aa26.7■■□□□ 1.86
LDLRAD3-203ENST00000528989 GTPBP10A4D1E9 387 aaKnown RBP26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 PMM2O15305 246 aa26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 N4BP1O75113 896 aaKnown RBP26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 KCNE1P15382 129 aa26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 SCNN1GP51170 649 aa26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 EPHB4P54760 987 aa26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 SOX4Q06945 474 aaPredicted RBP26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 CLLU1OSQ5K130 101 aa26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 TRIM65Q6PJ69 517 aa26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 CRIPAKQ8N1N5 446 aa26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 CPLX3Q8WVH0 158 aa26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 PDLIM2Q96JY6 352 aa26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 LSM14BQ9BX40 385 aaKnown RBP26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 GOLGA2P5Q9HBQ8 144 aa26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 RAB20Q9NX57 234 aa26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 SIX4Q9UIU6 781 aa26.69■■□□□ 1.86
LDLRAD3-203ENST00000528989 RNF225M0QZC1 329 aaPredicted RBP26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 P4HA2O15460 535 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 PHACTR2O75167 634 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 OFD1O75665 1012 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 NOL4O94818 638 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 POMCP01189 267 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 HLA-DRAP01903 254 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 TNNC2P02585 160 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 LRMPQ12912 555 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 GJB7Q6PEY0 223 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 OTOP2Q7RTS6 562 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 RPUSD2Q8IZ73 545 aaKnown RBP26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 EHBP1Q8NDI1 1231 aa26.68■■□□□ 1.86
LDLRAD3-203ENST00000528989 CXorf38Q8TB03 319 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms