RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SYTL5Q8TDW5 730 aaPredicted RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 PIGOQ8TEQ8 1089 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 STYXQ8WUJ0 223 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 ARHGEF2Q92974 986 aaKnown RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 EID2BQ96D98 161 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 C16orf45Q96MC5 204 aaPredicted RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 ALPK1Q96QP1 1244 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 PAIP2Q9BPZ3 127 aaKnown RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 DDX23Q9BUQ8 820 aaKnown RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 ACAT2Q9BWD1 397 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 TEX13BQ9BXU2 312 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 GPR63Q9BZJ6 419 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 CD244Q9BZW8 370 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 RABEP2Q9H5N1 569 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 ERVMER34-1Q9H9K5 563 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 NDFIP2Q9NV92 336 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 ADPRHL2Q9NX46 363 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 MCM9Q9NXL9 1143 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 ATXN7L1Q9ULK2 861 aaPredicted RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 PHF24Q9UPV7 400 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 GPR55Q9Y2T6 319 aaPredicted RBP4.92□□□□□ -1.62
CD44-213ENST00000525209 DTNAQ9Y4J8 743 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 FHOD1Q9Y613 1164 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 LMTK3Q96Q04 1460 aa4.92□□□□□ -1.62
CD44-213ENST00000525209 SLC12A8A0AV02 714 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 AKR1B15C9JRZ8 316 aaPredicted RBP4.91□□□□□ -1.62
CD44-213ENST00000525209 J3QW42 95 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 SPTLC2O15270 562 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 TXNL1O43396 289 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 ZNF862O60290 1169 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 SNX4O95219 450 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 SLU7O95391 586 aaKnown RBP4.91□□□□□ -1.62
CD44-213ENST00000525209 TNFRSF6BO95407 300 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 HNRNPA1P09651 372 aaKnown RBP eCLIP4.91□□□□□ -1.62
CD44-213ENST00000525209 JUPP14923 745 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 LAG3P18627 525 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 TFEBP19484 476 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 CD33P20138 364 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 TGM1P22735 817 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 CD40P25942 277 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 MAPK3P27361 379 aaPredicted RBP4.91□□□□□ -1.62
CD44-213ENST00000525209 AOAHP28039 575 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 RXRBP28702 533 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 RGS2P41220 211 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 ETF1P62495 437 aaKnown RBP4.91□□□□□ -1.62
CD44-213ENST00000525209 AMPD2Q01433 879 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 MC1RQ01726 317 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 RING1Q06587 406 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 KLHL30Q0D2K2 578 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 SCRN1Q12765 414 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 SLC14A1Q13336 389 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 SLC12A1Q13621 1099 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 MYBPC3Q14896 1274 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 ANKRD1Q15327 319 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 UGT8Q16880 541 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.91□□□□□ -1.62
CD44-213ENST00000525209 C3orf36Q3SXR2 165 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 CT83Q5H943 113 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 NBPF12Q5TAG4 269 aaPredicted RBP4.91□□□□□ -1.62
CD44-213ENST00000525209 MAP3K21Q5TCX8 1036 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 NFRKBQ6P4R8 1299 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 BORAQ6PGQ7 559 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 DCLRE1AQ6PJP8 1040 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 BBS12Q6ZW61 710 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 BEND5Q7L4P6 421 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 C12orf40Q86WS4 652 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 NOSTRINQ8IVI9 506 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 PLD6Q8N2A8 252 aaKnown RBP4.91□□□□□ -1.62
CD44-213ENST00000525209 ZFAND2BQ8WV99 257 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 THAP4Q8WY91 577 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 ZNF75CPQ92670 426 aaPredicted RBP4.91□□□□□ -1.62
CD44-213ENST00000525209 PTP4A1Q93096 173 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 EXOC4Q96A65 974 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 EAF2Q96CJ1 260 aaPredicted RBP4.91□□□□□ -1.62
CD44-213ENST00000525209 CALML4Q96GE6 196 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 BORCS6Q96GS4 357 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 DCAF5Q96JK2 942 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 CABS1Q96KC9 395 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 MFSD14AQ96MC6 490 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 ZDHHC15Q96MV8 337 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 COG8Q96MW5 612 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 TMEM237Q96Q45 408 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 GSDMAQ96QA5 445 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 GDF15Q99988 308 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 METTL22Q9BUU2 404 aaPredicted RBP4.91□□□□□ -1.62
CD44-213ENST00000525209 ITPAQ9BY32 194 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 DNAI2Q9GZS0 605 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 CCDC86Q9H6F5 360 aaKnown RBP4.91□□□□□ -1.62
CD44-213ENST00000525209 ARMT1Q9H993 441 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 LIN28AQ9H9Z2 209 aaKnown RBP4.91□□□□□ -1.62
CD44-213ENST00000525209 RRAGCQ9HB90 399 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 PDE7BQ9NP56 450 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 IGSF9Q9P2J2 1179 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 MORF4L1Q9UBU8 362 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 SUN2Q9UH99 717 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 CHORDC1Q9UHD1 332 aaPredicted RBP4.91□□□□□ -1.62
CD44-213ENST00000525209 GGA1Q9UJY5 639 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 CBLCQ9ULV8 474 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 EDARQ9UNE0 448 aa4.91□□□□□ -1.62
CD44-213ENST00000525209 MAN2B2Q9Y2E5 1009 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms