RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 C18orf25Q96B23 403 aaPredicted RBP10.09□□□□□ -0.79
SDCBP-212ENST00000523483 PPP1R9BQ96SB3 815 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 FHOD1Q9Y613 1164 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 FAM189A1O60320 539 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 STX10O60499 249 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 HLA-DRAP01903 254 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 CDC25BP30305 580 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 NCOA4Q13772 614 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 PAN2Q504Q3 1202 aaKnown RBP10.09□□□□□ -0.79
SDCBP-212ENST00000523483 TRAPPC11Q7Z392 1133 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 ZNF710Q8N1W2 664 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 TET1Q8NFU7 2136 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 SEMA4DQ92854 862 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 ERGIC2Q96RQ1 377 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 CGRRF1Q99675 332 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 TMX1Q9H3N1 280 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 RAB20Q9NX57 234 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 NRDCO43847 1150 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 N4BP1O75113 896 aaKnown RBP10.09□□□□□ -0.79
SDCBP-212ENST00000523483 COL6A1P12109 1028 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 CSF2RAP15509 400 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 CD58P19256 250 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 POLR2BP30876 1174 aaKnown RBP10.09□□□□□ -0.79
SDCBP-212ENST00000523483 GRM5P41594 1212 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 UBXN11Q5T124 520 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 C7orf61Q8IZ16 206 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 TMC2Q8TDI7 906 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 KAT5Q92993 513 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 ERVK-5Q9HDB9 667 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 SEPT11Q9NVA2 429 aaKnown RBP10.09□□□□□ -0.79
SDCBP-212ENST00000523483 SIK3Q9Y2K2 1263 aa10.09□□□□□ -0.79
SDCBP-212ENST00000523483 A0A1W2PQC6 194 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 ZBBXA8MT70 800 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 OFD1O75665 1012 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 CST3P01034 146 aaPredicted RBP10.08□□□□□ -0.8
SDCBP-212ENST00000523483 KRT5P13647 590 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 UCHL3P15374 230 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 SCNN1GP51170 649 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 MYL6P60660 151 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 PCBP1Q15365 356 aaKnown RBP eCLIP10.08□□□□□ -0.8
SDCBP-212ENST00000523483 ANKRD33Q7Z3H0 272 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 ABI1Q8IZP0 508 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 ANKLE1Q8NAG6 615 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 SMG8Q8ND04 991 aaKnown RBP10.08□□□□□ -0.8
SDCBP-212ENST00000523483 SEPT8Q92599 483 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 ZMAT2Q96NC0 199 aaKnown RBP10.08□□□□□ -0.8
SDCBP-212ENST00000523483 MMS19Q96T76 1030 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 WNT8AQ9H1J5 351 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 C1orf112Q9NSG2 853 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 TUBGCP4Q9UGJ1 667 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 LRFN2Q9ULH4 789 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 AGAP1Q9UPQ3 857 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 LRRC53A6NM62 1247 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 FGFR1P11362 822 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 GSDMDP57764 484 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 HSP90AA2PQ14568 343 aaPredicted RBP10.08□□□□□ -0.8
SDCBP-212ENST00000523483 WDR72Q3MJ13 1102 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 ZNF394Q53GI3 561 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 DPH6Q7L8W6 267 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 TMCO2Q7Z6W1 182 aaPredicted RBP10.08□□□□□ -0.8
SDCBP-212ENST00000523483 RPAINQ86UA6 219 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 WDR49Q8IV35 697 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 DPF3Q92784 378 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 TATDN2Q93075 761 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 NT5C1BQ96P26 610 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 ARID3AQ99856 593 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 ZNHIT6Q9NWK9 470 aaKnown RBP10.08□□□□□ -0.8
SDCBP-212ENST00000523483 DNAJC12Q9UKB3 198 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 ZMYND8Q9ULU4 1186 aaPredicted RBP10.08□□□□□ -0.8
SDCBP-212ENST00000523483 PLAGL2Q9UPG8 496 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 CASTOR2A6NHX0 329 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 SKILP12757 684 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 PBX1P40424 430 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 RNASELQ05823 741 aaKnown RBP10.08□□□□□ -0.8
SDCBP-212ENST00000523483 OTOP2Q7RTS6 562 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 CNGA4Q8IV77 575 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 ARHGEF19Q8IW93 802 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 USP38Q8NB14 1042 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 HASPINQ8TF76 798 aa10.08□□□□□ -0.8
SDCBP-212ENST00000523483 PUF60Q9UHX1 559 aaKnown RBP10.08□□□□□ -0.8
SDCBP-212ENST00000523483 PITPNM1O00562 1244 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 MAPK13O15264 365 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 MFAP3LO75121 409 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 IL18RAPO95256 599 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 ITGB8P26012 769 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 SURF1Q15526 300 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 ZNF699Q32M78 642 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 ZACNQ401N2 412 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 EHBP1Q8NDI1 1231 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 DEF6Q9H4E7 631 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 RSAD1Q9HA92 442 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 DPP3Q9NY33 737 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 IMPACTQ9P2X3 320 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 APEX2Q9UBZ4 518 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 SMIM28A0A1B0GU29 152 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 NOP14P78316 857 aaKnown RBP10.07□□□□□ -0.8
SDCBP-212ENST00000523483 KLHDC7AQ5VTJ3 777 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 IQCEQ6IPM2 695 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 PHLDB3Q6NSJ2 640 aa10.07□□□□□ -0.8
SDCBP-212ENST00000523483 TRAF7Q6Q0C0 670 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms