RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 NT5DC4Q86YG4 428 aa24.55■■□□□ 1.52
SKP1-206ENST00000519321 BRSK2Q8IWQ3 736 aa24.55■■□□□ 1.52
SKP1-206ENST00000519321 XXYLT1Q8NBI6 393 aa24.55■■□□□ 1.52
SKP1-206ENST00000519321 TMEM174Q8WUU8 243 aa24.55■■□□□ 1.52
SKP1-206ENST00000519321 ERCC4Q92889 916 aaPredicted RBP24.55■■□□□ 1.52
SKP1-206ENST00000519321 KIF12Q96FN5 646 aa24.55■■□□□ 1.52
SKP1-206ENST00000519321 KCTD10Q9H3F6 313 aa24.55■■□□□ 1.52
SKP1-206ENST00000519321 TLR9Q9NR96 1032 aa24.55■■□□□ 1.52
SKP1-206ENST00000519321 PLXNA4Q9HCM2 1894 aa24.54■■□□□ 1.52
SKP1-206ENST00000519321 CASTOR2A6NHX0 329 aa24.54■■□□□ 1.52
SKP1-206ENST00000519321 ZNF233A6NK53 670 aa24.54■■□□□ 1.52
SKP1-206ENST00000519321 RPL9P32969 192 aaKnown RBP24.54■■□□□ 1.52
SKP1-206ENST00000519321 STIM1Q13586 685 aa24.54■■□□□ 1.52
SKP1-206ENST00000519321 MYBPC2Q14324 1141 aa24.54■■□□□ 1.52
SKP1-206ENST00000519321 SURF1Q15526 300 aa24.54■■□□□ 1.52
SKP1-206ENST00000519321 NOC3LQ8WTT2 800 aaKnown RBP24.54■■□□□ 1.52
SKP1-206ENST00000519321 PPP2R3CQ969Q6 453 aa24.54■■□□□ 1.52
SKP1-206ENST00000519321 FBXL18Q96ME1 805 aa24.54■■□□□ 1.52
SKP1-206ENST00000519321 CLSTN2Q9H4D0 955 aa24.54■■□□□ 1.52
SKP1-206ENST00000519321 RBAKQ9NYW8 714 aaPredicted RBP24.54■■□□□ 1.52
SKP1-206ENST00000519321 MAN1B1Q9UKM7 699 aa24.54■■□□□ 1.52
SKP1-206ENST00000519321 TRAF3IP3Q9Y228 551 aa24.54■■□□□ 1.52
SKP1-206ENST00000519321 C2CD2Q9Y426 696 aa24.54■■□□□ 1.52
SKP1-206ENST00000519321 GOLGA8IPA6NC78 632 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 GOLGA8JA6NMD2 632 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 TADA2AO75478 443 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 ZBTB6Q15916 424 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 CAMK4Q16566 473 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 DCLRE1AQ6PJP8 1040 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 TMEM173Q86WV6 379 aaPredicted RBP24.53■■□□□ 1.52
SKP1-206ENST00000519321 SLC9A9Q8IVB4 645 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 TRIML1Q8N9V2 468 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 BEST2Q8NFU1 509 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 MICAL1Q8TDZ2 1067 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 NGRNQ9NPE2 291 aaKnown RBP24.53■■□□□ 1.52
SKP1-206ENST00000519321 MARCH5Q9NX47 278 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 KIAA1468Q9P260 1216 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 ADAM28Q9UKQ2 775 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 MAPK8IP1Q9UQF2 711 aa24.53■■□□□ 1.52
SKP1-206ENST00000519321 PDCD11Q14690 1871 aaKnown RBP24.53■■□□□ 1.52
SKP1-206ENST00000519321 TMEM189-UBE2V1I3L0A0 370 aa24.52■■□□□ 1.52
SKP1-206ENST00000519321 MBD3O95983 291 aa24.52■■□□□ 1.52
SKP1-206ENST00000519321 CYP2J2P51589 502 aa24.52■■□□□ 1.52
SKP1-206ENST00000519321 TMEM132DQ14C87 1099 aa24.52■■□□□ 1.52
SKP1-206ENST00000519321 NFIL3Q16649 462 aa24.52■■□□□ 1.52
SKP1-206ENST00000519321 UPP1Q16831 310 aa24.52■■□□□ 1.52
SKP1-206ENST00000519321 JADE1Q6IE81 842 aa24.52■■□□□ 1.52
SKP1-206ENST00000519321 NUP62CLQ9H1M0 184 aa24.52■■□□□ 1.52
SKP1-206ENST00000519321 NSUN3Q9H649 340 aaKnown RBP24.52■■□□□ 1.52
SKP1-206ENST00000519321 ENTPD7Q9NQZ7 604 aa24.52■■□□□ 1.52
SKP1-206ENST00000519321 EXOC3O60645 756 aa24.51■■□□□ 1.51
SKP1-206ENST00000519321 DNAJB1P25685 340 aa24.51■■□□□ 1.51
SKP1-206ENST00000519321 PRCPP42785 496 aa24.51■■□□□ 1.51
SKP1-206ENST00000519321 CLCNKBP51801 687 aa24.51■■□□□ 1.51
SKP1-206ENST00000519321 SOX4Q06945 474 aaPredicted RBP24.51■■□□□ 1.51
SKP1-206ENST00000519321 ELAVL2Q12926 359 aaKnown RBP24.51■■□□□ 1.51
SKP1-206ENST00000519321 CAMK1Q14012 370 aa24.51■■□□□ 1.51
SKP1-206ENST00000519321 SNRNP35Q16560 246 aaKnown RBP24.51■■□□□ 1.51
SKP1-206ENST00000519321 TMC7Q7Z402 723 aa24.51■■□□□ 1.51
SKP1-206ENST00000519321 SMYD4Q8IYR2 804 aaPredicted RBP24.51■■□□□ 1.51
SKP1-206ENST00000519321 VPS52Q8N1B4 723 aa24.51■■□□□ 1.51
SKP1-206ENST00000519321 ZSWIM2Q8NEG5 633 aa24.51■■□□□ 1.51
SKP1-206ENST00000519321 BCL7CQ8WUZ0 217 aaPredicted RBP24.51■■□□□ 1.51
SKP1-206ENST00000519321 C18orf25Q96B23 403 aaPredicted RBP24.51■■□□□ 1.51
SKP1-206ENST00000519321 TCF25Q9BQ70 676 aa24.51■■□□□ 1.51
SKP1-206ENST00000519321 PAAF1Q9BRP4 392 aa24.51■■□□□ 1.51
SKP1-206ENST00000519321 B3GAT3O94766 335 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 NR3C1P04150 777 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 RPL13P26373 211 aaKnown RBP24.5■■□□□ 1.51
SKP1-206ENST00000519321 LRPAP1P30533 357 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 SPAG1Q07617 926 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 MORC3Q14149 939 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 SMC1AQ14683 1233 aaKnown RBP24.5■■□□□ 1.51
SKP1-206ENST00000519321 SPATA1Q5VX52 437 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 FUT10Q6P4F1 479 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 CBWD2Q8IUF1 395 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 MICALL1Q8N3F8 863 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 MAFAQ8NHW3 353 aaPredicted RBP24.5■■□□□ 1.51
SKP1-206ENST00000519321 CACTINQ8WUQ7 758 aaKnown RBP24.5■■□□□ 1.51
SKP1-206ENST00000519321 TSG101Q99816 390 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 GOLGA2P5Q9HBQ8 144 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 DMAC2Q9NW81 257 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 SSX2IPQ9Y2D8 614 aa24.5■■□□□ 1.51
SKP1-206ENST00000519321 SF3B1O75533 1304 aaKnown RBP eCLIP24.5■■□□□ 1.51
SKP1-206ENST00000519321 CHD7Q9P2D1 2997 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 PODXLO00592 558 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 FSCN2O14926 492 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 TRAPPC3O43617 180 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 KIF4AO95239 1232 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 SOD2P04179 222 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 ERVFC1P60507 584 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 EDRF1Q3B7T1 1238 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 ADSSL1Q8N142 457 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 DHTKD1Q96HY7 919 aaPredicted RBP24.49■■□□□ 1.51
SKP1-206ENST00000519321 HERC2P3Q9BVR0 1158 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 ZBP1Q9H171 429 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 TUBGCP4Q9UGJ1 667 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 CDH23Q9H251 3354 aa24.49■■□□□ 1.51
SKP1-206ENST00000519321 PSMA7O14818 248 aa24.48■■□□□ 1.51
SKP1-206ENST00000519321 EFEMP2O95967 443 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms