RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 KIF26AQ9ULI4 1882 aaPredicted RBP8.63□□□□□ -1.03
CLDND1-229ENST00000513988 VWA8A3KMH1 1905 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 ADAMTS9Q9P2N4 1935 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 E9PAM4 449 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 NRG2O14511 850 aaPredicted RBP8.62□□□□□ -1.03
CLDND1-229ENST00000513988 RNF113AO15541 343 aaKnown RBP8.62□□□□□ -1.03
CLDND1-229ENST00000513988 PPP1R11O60927 126 aaPredicted RBP8.62□□□□□ -1.03
CLDND1-229ENST00000513988 C22orf31O95567 290 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 POMCP01189 267 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 HLA-EP13747 358 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 DARSP14868 501 aaKnown RBP8.62□□□□□ -1.03
CLDND1-229ENST00000513988 CR2P20023 1033 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 BCKDHBP21953 392 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 DPP6P42658 865 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 RAB27AP51159 221 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 CLCN3P51790 818 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 GRM4Q14833 912 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 UVSSAQ2YD98 709 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 ZNF746Q6NUN9 644 aaPredicted RBP8.62□□□□□ -1.03
CLDND1-229ENST00000513988 PRSS55Q6UWB4 352 aaPredicted RBP8.62□□□□□ -1.03
CLDND1-229ENST00000513988 NAXDQ8IW45 347 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 TTC8Q8TAM2 541 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 MED8Q96G25 268 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 LIN37Q96GY3 246 aaPredicted RBP8.62□□□□□ -1.03
CLDND1-229ENST00000513988 ZNF668Q96K58 619 aaPredicted RBP8.62□□□□□ -1.03
CLDND1-229ENST00000513988 PI4K2AQ9BTU6 479 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 TRAIPQ9BWF2 469 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 FAM117AQ9C073 453 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 AVENQ9NQS1 362 aaPredicted RBP8.62□□□□□ -1.03
CLDND1-229ENST00000513988 FAM105AQ9NUU6 356 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 SLC9A2Q9UBY0 812 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 SLC6A14Q9UN76 642 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 CENPEQ02224 2701 aa8.62□□□□□ -1.03
CLDND1-229ENST00000513988 ATXN2Q99700 1313 aaKnown RBP8.61□□□□□ -1.03
CLDND1-229ENST00000513988 WDR27A2RRH5 827 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 FAM149AA5PLN7 773 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 F8W810 466 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 TNFRSF10BO14763 440 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 ZBTB5O15062 677 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 CHADO15335 359 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 TLX3O43711 291 aaPredicted RBP8.61□□□□□ -1.03
CLDND1-229ENST00000513988 ZNF623O75123 536 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 NR1I2O75469 434 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 ZFYP08048 801 aaPredicted RBP8.61□□□□□ -1.03
CLDND1-229ENST00000513988 POU3F2P20265 443 aaPredicted RBP8.61□□□□□ -1.03
CLDND1-229ENST00000513988 AFF1P51825 1210 aaKnown RBP8.61□□□□□ -1.03
CLDND1-229ENST00000513988 ACTR2P61160 394 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 SEMG2Q02383 582 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 TRAF1Q13077 416 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 SLC14A1Q13336 389 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 MTMR1Q13613 665 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 PREPLQ4J6C6 727 aaPredicted RBP8.61□□□□□ -1.03
CLDND1-229ENST00000513988 FUT10Q6P4F1 479 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 ARMCX6Q7L4S7 300 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 LPCAT2Q7L5N7 544 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 GLRX5Q86SX6 157 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 PNMA1Q8ND90 353 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 OR2I1PQ8NGU4 316 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 TATDN2Q93075 761 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 NXPE2Q96DL1 559 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 KIF1BPQ96EK5 621 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 COLEC11Q9BWP8 271 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 GPR62Q9BZJ7 368 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 RSAD1Q9HA92 442 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 NPDC1Q9NQX5 325 aaPredicted RBP8.61□□□□□ -1.03
CLDND1-229ENST00000513988 TMEM74BQ9NUR3 256 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 DNAAF2Q9NVR5 837 aaKnown RBP8.61□□□□□ -1.03
CLDND1-229ENST00000513988 TSR3Q9UJK0 312 aaKnown RBP8.61□□□□□ -1.03
CLDND1-229ENST00000513988 ANAPC4Q9UJX5 808 aa8.61□□□□□ -1.03
CLDND1-229ENST00000513988 KNTC1P50748 2209 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 HEPACAM2A8MVW5 462 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 ZBTB42B2RXF5 422 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 ZNF197O14709 1029 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 TERTO14746 1132 aaKnown RBP8.6□□□□□ -1.03
CLDND1-229ENST00000513988 BACH1O14867 736 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 CSDE1O75534 798 aaKnown RBP8.6□□□□□ -1.03
CLDND1-229ENST00000513988 PARP1P09874 1014 aaKnown RBP8.6□□□□□ -1.03
CLDND1-229ENST00000513988 KRT10P13645 584 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 PTPN2P17706 415 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 TLE3Q04726 772 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 GRSF1Q12849 480 aaKnown RBP eCLIP8.6□□□□□ -1.03
CLDND1-229ENST00000513988 DUOXA1Q1HG43 343 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 C2orf27AQ580R0 203 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 NUDT18Q6ZVK8 323 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 COLGALT2Q8IYK4 626 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 KBTBD3Q8NAB2 608 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 CEP76Q8TAP6 659 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 TCEAL4Q96EI5 215 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 TMEM209Q96SK2 561 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 GAD1Q99259 594 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 TPSD1Q9BZJ3 242 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 LRRCC1Q9C099 1032 aa8.6□□□□□ -1.03
CLDND1-229ENST00000513988 PIN4Q9Y237 131 aaKnown RBP8.6□□□□□ -1.03
CLDND1-229ENST00000513988 NCANO14594 1321 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 CNTNAP2Q9UHC6 1331 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 IPO8O15397 1037 aaKnown RBP8.59□□□□□ -1.03
CLDND1-229ENST00000513988 RNF40O75150 1001 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 FGRP09769 529 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 MYF5P13349 255 aa8.59□□□□□ -1.03
CLDND1-229ENST00000513988 TRIM27P14373 513 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms