RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 MED25Q71SY5 747 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 UBE3BQ7Z3V4 1068 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 GDF7Q7Z4P5 450 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 PLXDC1Q8IUK5 500 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 ZNF276Q8N554 614 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 ZGPATQ8N5A5 531 aaKnown RBP6.94□□□□□ -1.3
CHD1-209ENST00000512844 SLC25A43Q8WUT9 341 aaPredicted RBP6.94□□□□□ -1.3
CHD1-209ENST00000512844 JPH3Q8WXH2 748 aaPredicted RBP6.94□□□□□ -1.3
CHD1-209ENST00000512844 MAP3K14Q99558 947 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 PACSIN1Q9BY11 444 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 GNL3LQ9NVN8 582 aaKnown RBP6.94□□□□□ -1.3
CHD1-209ENST00000512844 ZIM2Q9NZV7 527 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 CALCOCO1Q9P1Z2 691 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 PNMA8BQ9ULN7 279 aaPredicted RBP6.94□□□□□ -1.3
CHD1-209ENST00000512844 AKAP10O43572 662 aa6.93□□□□□ -1.3
CHD1-209ENST00000512844 ABLIM3O94929 683 aa6.93□□□□□ -1.3
CHD1-209ENST00000512844 PEX11BO96011 259 aa6.93□□□□□ -1.3
CHD1-209ENST00000512844 ITGB1P05556 798 aa6.93□□□□□ -1.3
CHD1-209ENST00000512844 HSPA6P17066 643 aa6.93□□□□□ -1.3
CHD1-209ENST00000512844 EDNRBP24530 442 aa6.93□□□□□ -1.3
CHD1-209ENST00000512844 CYP2C19P33261 490 aa6.93□□□□□ -1.3
CHD1-209ENST00000512844 CHN2P52757 468 aa6.93□□□□□ -1.3
CHD1-209ENST00000512844 RNASE9P60153 205 aaKnown RBP6.93□□□□□ -1.3
CHD1-209ENST00000512844 TARDBPQ13148 414 aaKnown RBP eCLIP6.93□□□□□ -1.3
CHD1-209ENST00000512844 UBXN2BQ14CS0 331 aa6.93□□□□□ -1.3
CHD1-209ENST00000512844 USP45Q70EL2 814 aa6.93□□□□□ -1.3
CHD1-209ENST00000512844 FITM2Q8N6M3 262 aa6.93□□□□□ -1.3
CHD1-209ENST00000512844 C3orf20Q8ND61 904 aa6.93□□□□□ -1.3
CHD1-209ENST00000512844 TCRBV7S2A1N4TA0A589 114 aa6.92□□□□□ -1.3
CHD1-209ENST00000512844 DRGXA6NNA5 263 aa6.92□□□□□ -1.3
CHD1-209ENST00000512844 RNASET2O00584 256 aaKnown RBP6.92□□□□□ -1.3
CHD1-209ENST00000512844 MATN3O15232 486 aa6.92□□□□□ -1.3
CHD1-209ENST00000512844 SLC16A6O15403 523 aa6.92□□□□□ -1.3
CHD1-209ENST00000512844 PPP2R5AQ15172 486 aa6.92□□□□□ -1.3
CHD1-209ENST00000512844 PGS1Q32NB8 556 aa6.92□□□□□ -1.3
CHD1-209ENST00000512844 PABPC1LQ4VXU2 614 aaKnown RBP6.92□□□□□ -1.3
CHD1-209ENST00000512844 MIIPQ5JXC2 388 aa6.92□□□□□ -1.3
CHD1-209ENST00000512844 FOXR2Q6PJQ5 311 aa6.92□□□□□ -1.3
CHD1-209ENST00000512844 CACTINQ8WUQ7 758 aaKnown RBP6.92□□□□□ -1.3
CHD1-209ENST00000512844 RGMAQ96B86 450 aa6.92□□□□□ -1.3
CHD1-209ENST00000512844 CAMKK2Q96RR4 588 aa6.92□□□□□ -1.3
CHD1-209ENST00000512844 SLC46A2Q9BY10 475 aa6.92□□□□□ -1.3
CHD1-209ENST00000512844 CEP72Q9P209 647 aa6.92□□□□□ -1.3
CHD1-209ENST00000512844 USP15Q9Y4E8 981 aaPredicted RBP6.92□□□□□ -1.3
CHD1-209ENST00000512844 LEFTY2O00292 366 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 RPS6KA4O75676 772 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 HAUS5O94927 633 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 FTLP02792 175 aaPredicted RBP6.91□□□□□ -1.3
CHD1-209ENST00000512844 CD1AP06126 327 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 GNAI3P08754 354 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 POU2F2P09086 479 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 TACR2P21452 398 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 GNAI1P63096 354 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 ATP8B2P98198 1209 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 SPDYE7PQ495Y7 208 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 DACT2Q5SW24 774 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 CATIPQ7Z7H3 387 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 GRAMD1CQ8IYS0 662 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 IFI44Q8TCB0 444 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 NSUN6Q8TEA1 469 aaKnown RBP6.91□□□□□ -1.3
CHD1-209ENST00000512844 ZNF483Q8TF39 744 aaPredicted RBP6.91□□□□□ -1.3
CHD1-209ENST00000512844 ZNF503Q96F45 646 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 MYOCQ99972 504 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 ZNF747Q9BV97 191 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 NRDE2Q9H7Z3 1164 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 METTL14Q9HCE5 456 aaKnown RBP6.91□□□□□ -1.3
CHD1-209ENST00000512844 NMRK2Q9NPI5 230 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 FEZ2Q9UHY8 353 aaPredicted RBP6.91□□□□□ -1.3
CHD1-209ENST00000512844 G3BP2Q9UN86 482 aaKnown RBP6.91□□□□□ -1.3
CHD1-209ENST00000512844 PCDHB1Q9Y5F3 818 aa6.91□□□□□ -1.3
CHD1-209ENST00000512844 GAGE12BA1L429 117 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 GAGE12HA6NDE8 117 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 GRM6O15303 877 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 ZNF202O95125 648 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 C6P13671 934 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 LAG3P18627 525 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 TNFRSF1AP19438 455 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 MAKP20794 623 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 MCM7P33993 719 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 DGCR2P98153 550 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 KHDC1Q4VXA5 237 aaKnown RBP6.9□□□□□ -1.3
CHD1-209ENST00000512844 TIGD2Q4W5G0 525 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 TSHZ3Q63HK5 1081 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 CHPFQ8IZ52 775 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 CAMKK1Q8N5S9 505 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 TBC1D15Q8TC07 691 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 HAS1Q92839 578 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 MVB12AQ96EY5 273 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 LRGUKQ96M69 825 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 VRK1Q99986 396 aaPredicted RBP6.9□□□□□ -1.3
CHD1-209ENST00000512844 RHOBTB2Q9BYZ6 727 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 CDH19Q9H159 772 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 RNPEPQ9H4A4 650 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 GSTO2Q9H4Y5 243 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 FAM30AQ9NZY2 134 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 RNF181Q9P0P0 153 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 SLC23A1Q9UHI7 598 aa6.9□□□□□ -1.3
CHD1-209ENST00000512844 PLSCR1O15162 318 aa6.89□□□□□ -1.31
CHD1-209ENST00000512844 FZD7O75084 574 aa6.89□□□□□ -1.31
CHD1-209ENST00000512844 ADH4P08319 380 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms