RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 GOLGA8IPA6NC78 632 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 GOLGA8JA6NMD2 632 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 IKBKBO14920 756 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 AKAP3O75969 853 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 CLDN10P78369 228 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 BFSP1Q12934 665 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 ANO6Q4KMQ2 910 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 SEZ6Q53EL9 994 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 SPATA1Q5VX52 437 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 FAM117BQ6P1L5 589 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 FRMD5Q7Z6J6 570 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 BEST2Q8NFU1 509 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 KIF12Q96FN5 646 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 DDX27Q96GQ7 796 aaKnown RBP11.11□□□□□ -0.63
HTT-204ENST00000508321 DUSP9Q99956 384 aaKnown RBP11.11□□□□□ -0.63
HTT-204ENST00000508321 PLVAPQ9BX97 442 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 PBX4Q9BYU1 374 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 DNAJC25Q9H1X3 360 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 KLK14Q9P0G3 267 aa11.11□□□□□ -0.63
HTT-204ENST00000508321 ARMCX3Q9UH62 379 aaPredicted RBP11.11□□□□□ -0.63
HTT-204ENST00000508321 COL4A4P53420 1690 aaPredicted RBP11.11□□□□□ -0.63
HTT-204ENST00000508321 CUL9Q8IWT3 2517 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 LACTBL1A8MY62 500 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 TMEM189-UBE2V1I3L0A0 370 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 MEFVO15553 781 aaPredicted RBP11.1□□□□□ -0.63
HTT-204ENST00000508321 N4BP1O75113 896 aaKnown RBP11.1□□□□□ -0.63
HTT-204ENST00000508321 POMCP01189 267 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 TNNC2P02585 160 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 CA3P07451 260 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 NFICP08651 508 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 TMEM191BP0C7N4 346 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 DNAJB2P25686 324 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 EEF1GP26641 437 aaKnown RBP11.1□□□□□ -0.63
HTT-204ENST00000508321 LRPAP1P30533 357 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 GTF2H1P32780 548 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 RPL9P32969 192 aaKnown RBP11.1□□□□□ -0.63
HTT-204ENST00000508321 VAMP7P51809 220 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 STX17P56962 302 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 ZNF445P59923 1031 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 SPAG1Q07617 926 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 CCDC40Q4G0X9 1142 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 PAN2Q504Q3 1202 aaKnown RBP11.1□□□□□ -0.63
HTT-204ENST00000508321 GLRA4Q5JXX5 417 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 FAM109BQ6ICB4 259 aaPredicted RBP11.1□□□□□ -0.63
HTT-204ENST00000508321 JADE1Q6IE81 842 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 LRSAM1Q6UWE0 723 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 C11orf57Q6ZUT1 292 aaPredicted RBP11.1□□□□□ -0.63
HTT-204ENST00000508321 TMCO2Q7Z6W1 182 aaPredicted RBP11.1□□□□□ -0.63
HTT-204ENST00000508321 PARD3BQ8TEW8 1205 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 ANKRD36BP1Q96IX9 119 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 ZNF560Q96MR9 790 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 ZNF558Q96NG5 402 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 MAGEC2Q9UBF1 373 aaPredicted RBP11.1□□□□□ -0.63
HTT-204ENST00000508321 ITGA11Q9UKX5 1188 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 NFE2L3Q9Y4A8 694 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 PCDHB12Q9Y5F1 795 aa11.1□□□□□ -0.63
HTT-204ENST00000508321 MRPL42Q9Y6G3 142 aaKnown RBP11.1□□□□□ -0.63
HTT-204ENST00000508321 ARHGEF37A1IGU5 675 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 LINC01553A4QN01 128 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 SMTNL1A8MU46 457 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 C5orf67F2Z3F1 127 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 ZC3H11AO75152 810 aaKnown RBP eCLIP11.09□□□□□ -0.63
HTT-204ENST00000508321 RB1P06400 928 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 DLATP10515 647 aaKnown RBP11.09□□□□□ -0.63
HTT-204ENST00000508321 PNPLA4P41247 253 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 ALDH7A1P49419 539 aaKnown RBP11.09□□□□□ -0.63
HTT-204ENST00000508321 CASP4P49662 377 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 ZNF165P49910 485 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 GATMP50440 423 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 RABGGTBP53611 331 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 TPM4P67936 248 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 ELAVL2Q12926 359 aaKnown RBP11.09□□□□□ -0.63
HTT-204ENST00000508321 NAB2Q15742 525 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 ZBTB6Q15916 424 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 DUOXA2Q1HG44 320 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 SPOUT1Q5T280 376 aaKnown RBP11.09□□□□□ -0.63
HTT-204ENST00000508321 PPP2R2DQ66LE6 453 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 GPR153Q6NV75 609 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 EFCAB13Q8IY85 973 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 COLGALT2Q8IYK4 626 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 ZSWIM2Q8NEG5 633 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 ANKRD20A12PQ8NF67 263 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 FAM200AQ8TCP9 573 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 TIFAQ96CG3 184 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 FAM212AQ96EL1 285 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 BORCS6Q96GS4 357 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 ZMAT2Q96NC0 199 aaKnown RBP11.09□□□□□ -0.63
HTT-204ENST00000508321 TGS1Q96RS0 853 aaKnown RBP11.09□□□□□ -0.63
HTT-204ENST00000508321 C11orf84Q9BUA3 381 aaPredicted RBP11.09□□□□□ -0.63
HTT-204ENST00000508321 TSPY26PQ9H489 355 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 CWH43Q9H720 699 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 SLC28A3Q9HAS3 691 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 PDE11AQ9HCR9 933 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 INTS13Q9NVM9 706 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 PLAGL2Q9UPG8 496 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 R3HCC1Q9Y3T6 440 aaKnown RBP11.09□□□□□ -0.63
HTT-204ENST00000508321 TSC2P49815 1807 aa11.09□□□□□ -0.63
HTT-204ENST00000508321 BECN2A8MW95 431 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 GRXCR1A8MXD5 290 aa11.08□□□□□ -0.64
HTT-204ENST00000508321 TPM2P07951 284 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms