RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ZBTB41Q5SVQ8 909 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 TMC7Q7Z402 723 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 TMEM173Q86WV6 379 aaPredicted RBP16.3■□□□□ 0.2
RNF4-210ENST00000508235 NT5DC4Q86YG4 428 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 C12orf56Q8IXR9 622 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 VPS52Q8N1B4 723 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 SPATA20Q8TB22 786 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 FAM212AQ96EL1 285 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 ZMAT2Q96NC0 199 aaKnown RBP16.3■□□□□ 0.2
RNF4-210ENST00000508235 TCF25Q9BQ70 676 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 CXCL16Q9H2A7 254 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 PCIF1Q9H4Z3 704 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 ENTPD7Q9NQZ7 604 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 MARCH5Q9NX47 278 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 ADAM28Q9UKQ2 775 aa16.3■□□□□ 0.2
RNF4-210ENST00000508235 SF3B1O75533 1304 aaKnown RBP eCLIP16.29■□□□□ 0.24e-6■■■■■ 99.4
RNF4-210ENST00000508235 ZNF233A6NK53 670 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 TMEM189-UBE2V1I3L0A0 370 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 PDXKO00764 312 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 FSCN2O14926 492 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 CALUO43852 315 aaPredicted RBP16.29■□□□□ 0.2
RNF4-210ENST00000508235 SLC34A2O95436 690 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 CYP3A5P20815 502 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 PPP1R2P41236 205 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 TMEM132DQ14C87 1099 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 SURF1Q15526 300 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 ZNF658Q5TYW1 1059 aaPredicted RBP16.29■□□□□ 0.2
RNF4-210ENST00000508235 DCLRE1AQ6PJP8 1040 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 CRELD2Q6UXH1 353 aaPredicted RBP16.29■□□□□ 0.2
RNF4-210ENST00000508235 GUF1Q8N442 669 aaKnown RBP16.29■□□□□ 0.2
RNF4-210ENST00000508235 BEST2Q8NFU1 509 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 NOC3LQ8WTT2 800 aaKnown RBP16.29■□□□□ 0.2
RNF4-210ENST00000508235 SAAL1Q96ER3 474 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 RBAKQ9NYW8 714 aaPredicted RBP16.29■□□□□ 0.2
RNF4-210ENST00000508235 HSPBP1Q9NZL4 362 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 C2CD2Q9Y426 696 aa16.29■□□□□ 0.2
RNF4-210ENST00000508235 PRRC2BQ5JSZ5 2229 aaKnown RBP16.29■□□□□ 0.2
RNF4-210ENST00000508235 CHD9Q3L8U1 2897 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 MEFVO15553 781 aaPredicted RBP16.28■□□□□ 0.2
RNF4-210ENST00000508235 TRAPPC3O43617 180 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 B3GAT3O94766 335 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 SOD2P04179 222 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 CTSAP10619 480 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 ERVFC1P60507 584 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 MYBPC2Q14324 1141 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 CCDC85BQ15834 202 aaPredicted RBP16.28■□□□□ 0.2
RNF4-210ENST00000508235 ZBTB6Q15916 424 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 UPP1Q16831 310 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 COBLL1Q53SF7 1204 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 JADE1Q6IE81 842 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 BRSK2Q8IWQ3 736 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 XXYLT1Q8NBI6 393 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 TMEM174Q8WUU8 243 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 BCL7CQ8WUZ0 217 aaPredicted RBP16.28■□□□□ 0.2
RNF4-210ENST00000508235 PPM1EQ8WY54 764 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 CDCA3Q99618 268 aaPredicted RBP16.28■□□□□ 0.2
RNF4-210ENST00000508235 HERC2P3Q9BVR0 1158 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 ZBP1Q9H171 429 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 KCTD10Q9H3F6 313 aa16.28■□□□□ 0.2
RNF4-210ENST00000508235 GOLGA8IPA6NC78 632 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 GOLGA8JA6NMD2 632 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 PODXLO00592 558 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 CLIC2O15247 247 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 CSPG5O95196 566 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 KIF4AO95239 1232 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 URODP06132 367 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 PAX3P23760 479 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 RPL13P26373 211 aaKnown RBP16.27■□□□□ 0.2
RNF4-210ENST00000508235 LRPAP1P30533 357 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 IRS1P35568 1242 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 CLCNKBP51801 687 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 SOX4Q06945 474 aaPredicted RBP16.27■□□□□ 0.2
RNF4-210ENST00000508235 STIM1Q13586 685 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 SKIV2LQ15477 1246 aaKnown RBP16.27■□□□□ 0.2
RNF4-210ENST00000508235 TCEAL5Q5H9L2 206 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 SPATA1Q5VX52 437 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 PLPP4Q5VZY2 271 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 KIAA1841Q6NSI8 718 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 FUT10Q6P4F1 479 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 SLC9A9Q8IVB4 645 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 GPR65Q8IYL9 337 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 RNF168Q8IYW5 571 aaPredicted RBP16.27■□□□□ 0.2
RNF4-210ENST00000508235 MRPL43Q8N983 215 aaKnown RBP16.27■□□□□ 0.2
RNF4-210ENST00000508235 CACTINQ8WUQ7 758 aaKnown RBP16.27■□□□□ 0.2
RNF4-210ENST00000508235 C18orf25Q96B23 403 aaPredicted RBP16.27■□□□□ 0.2
RNF4-210ENST00000508235 FBXL18Q96ME1 805 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 PAAF1Q9BRP4 392 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 MRPL17Q9NRX2 175 aaKnown RBP16.27■□□□□ 0.2
RNF4-210ENST00000508235 LMBRD1Q9NUN5 540 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 TRAF3IP3Q9Y228 551 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 IRAK3Q9Y616 596 aa16.27■□□□□ 0.2
RNF4-210ENST00000508235 EXOC3O60645 756 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 CXCL14O95715 111 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 EFEMP2O95967 443 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 NFICP08651 508 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 CA8P35219 290 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 GLUD2P49448 558 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 CYP2J2P51589 502 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 SPAG1Q07617 926 aa16.26■□□□□ 0.19
RNF4-210ENST00000508235 SNRNP35Q16560 246 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms